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Matthieu Schaller authoredMatthieu Schaller authored
INSTALL.swift 5.22 KiB
Building SWIFT
==============
SWIFT is built from a clean source repository using the commands:
./autogen
./configure
make
and from a distribution tarball using:
./configure
make
The compiler choice is GCC by default, but that can be changed using the "CC"
environment variable. This can be just set, or passed on the ./configure
command line, i.e.:
bash:
export CC=icc
./configure
[t]csh:
setenv CC=icc
./configure
or:
./configure CC=icc
to use an Intel compiler. The main "programs" can be found in the "examples/"
directory. See README for run parameters.
SWIFT has been successfully built and tested with the following compilers:
- GCC 4.8.x
- Intel ICC 15.0.x
- clang 3.4.x
More recent versions and slightly older ones should also be able to
build the software.
By default an attempt to choose suitable set of optimizing compiler flags
will be made, targeted for the host machine of the build. If this doesn't
work or the binaries will for another architecture then you can stop the
selection of flags using:
./configure --disable-optimization
and then supply your own flags using the "CFLAGS" environment variable, as for
CC.
Note that any CFLAGS that you supply will be added to those determined by
configure in all circumstances. To build SWIFT with debugging support you
can use:
./configure --enable-debug --disable-optimization
You could also add some additional flags:
./configure --enable-debug --disable-optimization CFLAGS="-O2"
for instance. GCC address sanitizer flags can be included using the
./configure --enable-sanitizer
option. Note this requires a GCC compiler version of at least 4.8.
By default vectorization is switched on. The highest instruction set
available on the platform will be automatically used. However, not all
implementations of SPH available in the code have vectorized
routines. Vectorization will have to be switched off for these. It can
also be switched off for benchmarking purposes. To do so, you can use:
./configure --disable-vec
Dependencies
============
SWIFT depends on a number of third party libraries that should be available
before you can build it.
- HDF5: a HDF5 library (v. 1.8.x or higher) is required to read and
write particle data. One of the commands "h5cc" or "h5pcc"
should be available. If "h5pcc" is located them a parallel
HDF5 built for the version of MPI located should be
provided. If the command is not available then it can be
located using the "--with-hfd5" configure option. The value
should be the full path to the "h5cc" or "h5pcc" commands.
- MPI: to run on more than one node an MPI library that fully
supports MPI_THREAD_MULTIPLE. Before running configure the
"mpirun" command should be available in the shell. If your
command isn't called "mpirun" then define the "MPIRUN"
environment variable, either in the shell or when running
configure.
The MPI compiler can be controlled using the MPICC variable,
much like the CC one. Use this when your MPI compiler has a
none-standard name.
- libtool: The build system relies on libtool.
Optional Dependencies
=====================
- METIS: a build of the METIS library can be optionally used to
optimize the load between MPI nodes (requires an MPI
library). This should be found in the standard installation
directories, or pointed at using the "--with-metis"
configuration option. In this case the top-level
installation directory of the METIS build should be
given. Note to use METIS you should at least supply
"--with-metis".
- libNUMA: a build of the NUMA library can be used to pin the threads
to the physical core of the machine SWIFT is running
on. This is not always necessary as the OS scheduler may
do a good job at distributing the threads among the
different cores on each computing node.
- TCMalloc: a build of the TCMalloc library (part of gperftools) can
be used to obtain faster allocations than the standard C
malloc function part of glibc. The option "-with-tcmalloc"
should be passed to the configuration script to use it.
- gperftools: a build of gperftools can be used to obtain good
profiling of the code. The option "-with-profiler"
needs to be passed to the configuration script to use
it.
- DOXYGEN: the doxygen library is required to create the SWIFT API
documentation.
- python: Examples and solution script use python and rely on the
numpy library version 1.8.2 or higher.
SWIFT Coding style
==================
The SWIFT source code is using a variation of the 'Google' style. The
script 'format.sh' in the root directory applies the clang-format-3.8
tool with our style choices to all the SWIFT C source file. Please
apply the formatting script to the files before submitting a merge
request.