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Logger move task

Loic Hausammann requested to merge logger_move_task into master

Currently, the logger writes the particles after the kick1. It means that the velocities are at t + 0.5 dt and the positions are at t. The only place where both are synchronized is after the kick2, therefore this merge request is moving the task after the kick2.

I am also changing runner_do_logger. We are currently writing the particles when they start. I am changing this in order to write them at the end of their step.

@nnrw56 We can discuss it tomorrow.

Edited by Matthieu Schaller

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