Merge branch 'master' into 'repart-time'

.gitignore

INSTALL.swift

configure.ac

examples/DiscPatch/HydroStatic/disc-patch-icc.yml

examples/DiscPatch/HydroStatic/makeIC.py

examples/main.c

examples/parameter_example.yml

m4/ax_cc_maxopt.m4

m4/ax_gcc_archflag.m4

m4/ax_pthread.m4

src/Makefile.am

src/barrier.h

src/cache.h

src/cell.c

src/cell.h

src/common_io.c

src/const.h

src/dump.c

src/dump.h

src/engine.c