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No shadowed variables

Matthieu Schaller requested to merge removed_variable_shadowing into master

Some small improvements to the code:

  • Force compiler to report shadowed variables.
  • Removed all shadowed variables.
  • Added the function scheduler_activate_send() to simplify the unskipping of MPI sends.

This comes after me spending a day and a half tracking a bug that came from a shadowed variable.

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