deal with custom path

.gitlab-ci.yml

@@ -28,7 +28,6 @@ before_script:
   - cd ..
 
 # compile pyswiftsim
-  - cat swiftsim/Makefile
   - python3 setup.py install --with-swift $LHOME/swiftsim --user
 
 # compile the docs

setup.py

@@ -82,7 +82,9 @@ if swift_path:
     # hdf5
     if "bin" in hdf5_root:
         hdf5_root = hdf5_root.split("bin")[0]
-    include.append(hdf5_root + "/include")
+
+    if "/usr/lib" in hdf5_root:
+        include.append("/usr/include/hdf5/serial")
 
     # grackle
     if parseCmdLine("--with-grackle", store=True):