Writing healpix HDF5 files error
Having some trouble trying to get some healpix outputs from a simulation run with lightcone on.
Setup is a basic DMO box, but when it reaches time to output the healpix info I get some HDF5 errors
HDF5-DIAG: Error detected in HDF5 (1.10.6) MPI-process 13:
#HDF5-DIAG: Error detected in HDF5 000: H5D.c line 151 iHDF5-DIAG: Error detected iHDF5-DIAG: Err(1.10.6) MPI-process 9:
#000: H5D.c line 151n H5Dcreate2(): unable to create dataset
man HDF5 (1.10.6) MPI-process 59:
#or detected in HDF5 ( in H5Dcreate2(): unable to create dataset
majorjor: Dataset
minor: Unable to initialize object000: H5D.c line HDF5-DIAG: Error detected in HDF5 (HDF5-DIAG: Error detected in1.10.6) MPI-proc: Dataset
minor: HDF5-DIAG: Error detected in
#001: H5Dint.c linHDF5-DIAG: Error detected HDF5-DIAG: Error detected i151 in H5Dcreate2(): unable to create dataset
HDF5-DIAG: Error detected inHDF5-DIAG: Error detected in HDF5-DIAG: Error detected i1.10.6) MPI-process 61:
#000: H5D.c HDF5 (1.10.6) MPI-process 2:
#ess 0:
#Unable to initialize object
#001: H5Dint.c lHDF5-DIAG: Error detecte HDF5 (1.10.6) MPI-process 17:
#000: H5D.c line 151 in H5Dcreate2(e 337 in H5D__create_named(): unable to create and link to datasetHDF5-DIAG: Error detected in HDF5-DIAG: HDF5-DIAG: Error detected HDF5-DIAG: in HDF5 (1.10.6) MPI-process 42:
#000HDF5-DIAG: Error detectedHDF5-DIAG: Errn HDF5 (1.10.6) MPI-process 20:
# major: Dataset
minHDF5-DIAG: Error detected i HDF5 (1.10.6) MPI-process 70:
#HDF5-DIAG: Error detected in HDF5 (1.10.6) MPI-process 37:
#000HDF5-DIAG: EHDF5-DIAG: ErrHDF5 (1.10.6) MPI-process 57:
#000: HDF5-DIAG: Error detected in HDF5 (1.10.6) MPHDF5-DIAG: Error detected in HDF5-DIAG: Error dn HDF5 (1.10.6) MPI-process 78:
#HDF5-DIAG: Error detected in line 151 in H5Dcreate2HDF5-DIAG: Error detected in HDF5 (1.10.6) MPI-pro000: H5D.c line 151 in 000: H5D.c liine 337 in H5D__create_named(): unable to create and link to dataset
mad in HDF5 (1.10.6) M): unable to create dataset
major: Dataset
mino
major: Dataset
The lightcone particles output works fine.
Here is my param file
LightconeCommon:
subdir: lightcones # All lightcone output is written to this directory
buffer_chunk_size: 100000 # Particles and map updates are buffered in a linked list of chunks of this size
z_range_for_DM: [0.0, 0.7]
max_particles_buffered: 10000000 # Output particles if buffer size reaches this value
max_updates_buffered: 10000000 # Flush map updates if buffer size reaches this value
hdf5_chunk_size: 32768
radius_file: shell_redshifts.txt
nside: 4
map_names_file: map_types.txt
Lightcone0:
enabled: 1 # Enable this lightcone
basename: lightcone0 # Base name of this lighcone's output files
observer_position: [3157.12187958884,3010.2790014684288,1908.957415565345] # Location of the observer in this lightcone
My map types file
TotalMass on
DarkMatterMass off
NeutrinoMass off