diff --git a/examples/Makefile.am b/examples/Makefile.am index e6f014ca7bc596af803af2d6963b32c02915dd93..cc4bfc78a6ff144a8c9a7cd9d4db9110fcc8f4fb 100644 --- a/examples/Makefile.am +++ b/examples/Makefile.am @@ -59,52 +59,51 @@ swift_mpi_CFLAGS = $(MYFLAGS) $(AM_CFLAGS) $(MPI_FLAGS) -DENGINE_POLICY="engine_ swift_mpi_LDADD = ../src/.libs/libswiftsim_mpi.a ../argparse/.libs/libargparse.a $(MPI_LIBS) $(EXTRA_LIBS) # Scripts to generate ICs -EXTRA_DIST = CoolingBox/coolingBox.yml CoolingBox/energy_plot.py CoolingBox/makeIC.py CoolingBox/run.sh \ - ConstantCosmoVolume/run.sh ConstantCosmoVolume/makeIC.py ConstantCosmoVolume/plotSolution.py ConstantCosmoVolume/constant_volume.yml \ - EAGLE_6/eagle_6.yml EAGLE_6/getIC.sh EAGLE_6/README EAGLE_6/run.sh \ - EAGLE_12/eagle_12.yml EAGLE_12/getIC.sh EAGLE_12/README EAGLE_12/run.sh \ - EAGLE_25/eagle_25.yml EAGLE_25/getIC.sh EAGLE_25/README EAGLE_25/run.sh \ - EAGLE_50/eagle_50.yml EAGLE_50/getIC.sh EAGLE_50/README EAGLE_50/run.sh \ - EAGLE_100/eagle_100.yml EAGLE_100/getIC.sh EAGLE_100/README EAGLE_100/run.sh \ - EAGLE_DMO_12/eagle_12.yml EAGLE_DMO_12/getIC.sh EAGLE_DMO_12/README EAGLE_DMO_12/run.sh \ - EAGLE_DMO_25/eagle_25.yml EAGLE_DMO_25/getIC.sh EAGLE_DMO_25/README EAGLE_DMO_25/run.sh \ - EAGLE_DMO_50/eagle_50.yml EAGLE_DMO_50/getIC.sh EAGLE_DMO_50/README EAGLE_DMO_50/run.sh \ - EAGLE_DMO_100/eagle_100.yml EAGLE_DMO_100/getIC.sh EAGLE_DMO_100/README EAGLE_DMO_100/run.sh \ - EvrardCollapse_3D/evrard.yml EvrardCollapse_3D/makeIC.py EvrardCollapse_3D/plotSolution.py EvrardCollapse_3D/run.sh EvrardCollapse_3D/getReference.sh \ - ExternalPointMass/externalPointMass.yml ExternalPointMass/makeIC.py ExternalPointMass/run.sh ExternalPointMass/energy_plot.py \ - GreshoVortex_2D/getGlass.sh GreshoVortex_2D/gresho.yml GreshoVortex_2D/makeIC.py GreshoVortex_2D/plotSolution.py GreshoVortex_2D/run.sh \ - GreshoVortex_3D/getGlass.sh GreshoVortex_3D/gresho.yml GreshoVortex_3D/makeIC.py GreshoVortex_3D/plotSolution.py GreshoVortex_3D/run.sh \ - HydrostaticHalo/README HydrostaticHalo/hydrostatic.yml HydrostaticHalo/makeIC.py HydrostaticHalo/run.sh \ - HydrostaticHalo/density_profile.py HydrostaticHalo/velocity_profile.py HydrostaticHalo/internal_energy_profile.py HydrostaticHalo/test_energy_conservation.py \ - InteractingBlastWaves_1D/run.sh InteractingBlastWaves_1D/makeIC.py InteractingBlastWaves_1D/plotSolution.py InteractingBlastWaves_1D/interactingBlastWaves.yml InteractingBlastWaves_1D/getReference.sh \ +EXTRA_DIST = Cooling/CoolingBox/coolingBox.yml Cooling/CoolingBox/energy_plot.py Cooling/CoolingBox/makeIC.py Cooling/CoolingBox/run.sh \ + Cosmology/ConstantCosmoVolume/run.sh Cosmology/ConstantCosmoVolume/makeIC.py Cosmology/ConstantCosmoVolume/plotSolution.py Cosmology/ConstantCosmoVolume/constant_volume.yml \ + EAGLE_low_z/EAGLE_6/eagle_6.yml EAGLE_low_z/EAGLE_6/getIC.sh EAGLE_low_z/EAGLE_6/README EAGLE_6/run.sh \ + EAGLE_low_z/EAGLE_12/eagle_12.yml EAGLE_low_z/EAGLE_12/getIC.sh EAGLE_low_z/EAGLE_12/README EAGLE_12/run.sh \ + EAGLE_low_z/EAGLE_25/eagle_25.yml EAGLE_low_z/EAGLE_25/getIC.sh EAGLE_low_z/EAGLE_25/README EAGLE_low_z/EAGLE_25/run.sh \ + EAGLE_low_z/EAGLE_50/eagle_50.yml EAGLE_low_z/EAGLE_50/getIC.sh EAGLE_low_z/EAGLE_50/README EAGLE_low_z/EAGLE_50/run.sh \ + EAGLE_low_z/EAGLE_100/eagle_100.yml EAGLE_low_z/EAGLE_100/getIC.sh EAGLE_low_z/EAGLE_100/README EAGLE_low_z/EAGLE_100/run.sh \ + EAGLE_DMO_low_z/EAGLE_DMO_12/eagle_12.yml EAGLE_DMO_low_z/EAGLE_DMO_12/getIC.sh EAGLE_DMO_low_z/EAGLE_DMO_12/README EAGLE_DMO_low_z/EAGLE_DMO_12/run.sh \ + EAGLE_DMO_low_z/EAGLE_DMO_25/eagle_25.yml EAGLE_DMO_low_z/EAGLE_DMO_25/getIC.sh EAGLE_DMO_low_z/EAGLE_DMO_25/README EAGLE_DMO_low_z/EAGLE_DMO_25/run.sh \ + EAGLE_DMO_low_z/EAGLE_DMO_50/eagle_50.yml EAGLE_DMO_low_z/EAGLE_DMO_50/getIC.sh EAGLE_DMO_low_z/EAGLE_DMO_50/README EAGLE_DMO_low_z/EAGLE_DMO_50/run.sh \ + EAGLE_DMO_low_z/EAGLE_DMO_100/eagle_100.yml EAGLE_DMO_low_z/EAGLE_DMO_100/getIC.sh EAGLE_DMO_low_z/EAGLE_DMO_100/README EAGLE_DMO_low_z/EAGLE_DMO_100/run.sh \ + HydroTests/EvrardCollapse_3D/evrard.yml HydroTests/EvrardCollapse_3D/makeIC.py HydroTests/EvrardCollapse_3D/plotSolution.py HydroTests/EvrardCollapse_3D/run.sh HydroTests/EvrardCollapse_3D/getReference.sh \ + GravityTests/ExternalPointMass/externalPointMass.yml GravityTests/ExternalPointMass/makeIC.py GravityTests/ExternalPointMass/run.sh GravityTests/ExternalPointMass/energy_plot.py \ + HydroTests/GreshoVortex_2D/getGlass.sh HydroTests/GreshoVortex_2D/gresho.yml HydroTests/GreshoVortex_2D/makeIC.py HydroTests/GreshoVortex_2D/plotSolution.py HydroTests/GreshoVortex_2D/run.sh \ + HydroTests/GreshoVortex_3D/getGlass.sh HydroTests/GreshoVortex_3D/gresho.yml HydroTests/GreshoVortex_3D/makeIC.py HydroTests/GreshoVortex_3D/plotSolution.py HydroTests/GreshoVortex_3D/run.sh \ + GravityTests/HydrostaticHalo/README GravityTests/HydrostaticHalo/hydrostatic.yml GravityTests/HydrostaticHalo/makeIC.py GravityTests/HydrostaticHalo/run.sh \ + GravityTests/HydrostaticHalo/density_profile.py GravityTests/HydrostaticHalo/velocity_profile.py GravityTests/HydrostaticHalo/internal_energy_profile.py GravityTests/HydrostaticHalo/test_energy_conservation.py \ + HydroTests/InteractingBlastWaves_1D/run.sh HydroTests/InteractingBlastWaves_1D/makeIC.py HydroTests/InteractingBlastWaves_1D/plotSolution.py HydroTests/InteractingBlastWaves_1D/interactingBlastWaves.yml HydroTests/InteractingBlastWaves_1D/getReference.sh \ IsothermalPotential/README IsothermalPotential/run.sh IsothermalPotential/energy_plot.py IsothermalPotential/isothermal.yml IsothermalPotential/makeIC.py \ - KelvinHelmholtz_2D/kelvinHelmholtz.yml KelvinHelmholtz_2D/makeIC.py KelvinHelmholtz_2D/plotSolution.py KelvinHelmholtz_2D/run.sh \ - MultiTypes/makeIC.py MultiTypes/multiTypes.yml MultiTypes/run.sh \ - Noh_1D/makeIC.py Noh_1D/noh.yml Noh_1D/plotSolution.py Noh_1D/run.sh \ - Noh_2D/makeIC.py Noh_2D/noh.yml Noh_2D/plotSolution.py Noh_2D/run.sh Noh_2D/getGlass.sh \ - Noh_3D/makeIC.py Noh_3D/noh.yml Noh_3D/plotSolution.py Noh_3D/run.sh Noh_3D/getGlass.sh \ - PerturbedBox_2D/makeIC.py PerturbedBox_2D/perturbedPlane.yml \ - PerturbedBox_3D/makeIC.py PerturbedBox_3D/perturbedBox.yml PerturbedBox_3D/run.sh \ - PMillennium-384/p-mill-384.yml \ - PMillennium-768/p-mill-768.yml \ - SantaBarbara/README SantaBarbara/getIC.sh SantaBarbara/santa_barbara.yml SantaBarbara/run.sh \ - SantaBarbara_low/README SantaBarbara_low/getIC.sh SantaBarbara_low/santa_barbara.yml SantaBarbara_low/run.sh \ - SedovBlast_1D/makeIC.py SedovBlast_1D/plotSolution.py SedovBlast_1D/run.sh SedovBlast_1D/sedov.yml \ - SedovBlast_2D/getGlass.sh SedovBlast_2D/makeIC.py SedovBlast_2D/plotSolution.py SedovBlast_2D/run.sh SedovBlast_2D/sedov.yml \ - SedovBlast_3D/getGlass.sh SedovBlast_3D/makeIC.py SedovBlast_3D/plotSolution.py SedovBlast_3D/run.sh SedovBlast_3D/sedov.yml \ - SineWavePotential_1D/makeIC.py SineWavePotential_1D/plotSolution.py SineWavePotential_1D/run.sh SineWavePotential_1D/sineWavePotential.yml \ - SineWavePotential_2D/makeIC.py SineWavePotential_2D/plotSolution.py SineWavePotential_2D/run.sh SineWavePotential_2D/sineWavePotential.yml \ - SineWavePotential_3D/makeIC.py SineWavePotential_3D/plotSolution.py SineWavePotential_3D/run.sh SineWavePotential_3D/sineWavePotential.yml \ - SmallCosmoVolume/README SmallCosmoVolume/getIC.sh SmallCosmoVolume/run.sh SmallCosmoVolume/small_cosmo_volume.yml SmallCosmoVolume/plotTempEvolution.py \ - SmallCosmoVolume_DM/README SmallCosmoVolume_DM/getIC.sh SmallCosmoVolume_DM/run.sh SmallCosmoVolume_DM/small_cosmo_volume_dm.yml SmallCosmoVolume_DM/stf_input_6dfof_dmonly_sub.cfg \ - SodShock_1D/makeIC.py SodShock_1D/plotSolution.py SodShock_1D/run.sh SodShock_1D/sodShock.yml \ - SodShock_2D/getGlass.sh SodShock_2D/makeIC.py SodShock_2D/plotSolution.py SodShock_2D/run.sh SodShock_2D/sodShock.yml \ - SodShock_3D/getGlass.sh SodShock_3D/makeIC.py SodShock_3D/plotSolution.py SodShock_3D/run.sh SodShock_3D/sodShock.yml \ - SquareTest_2D/makeIC.py SquareTest_2D/plotSolution.py SquareTest_2D/run.sh SquareTest_2D/square.yml \ - UniformBox_2D/makeIC.py UniformBox_2D/run.sh UniformBox_2D/uniformPlane.yml \ - UniformBox_3D/makeICbig.py UniformBox_3D/makeIC.py UniformBox_3D/run.sh UniformBox_3D/uniformBox.yml \ - Gravity_glass/makeIC.py Gravity_glass/README Gravity_glass/uniform_DM_box.yml \ - ZeldovichPancake_3D/makeIC.py ZeldovichPancake_3D/zeldovichPancake.yml ZeldovichPancake_3D/run.sh ZeldovichPancake_3D/plotSolution.py + HydroTests/KelvinHelmholtz_2D/kelvinHelmholtz.yml HydroTests/KelvinHelmholtz_2D/makeIC.py HydroTests/KelvinHelmholtz_2D/plotSolution.py HydroTests/KelvinHelmholtz_2D/run.sh \ + HydroTests/Noh_1D/makeIC.py HydroTests/Noh_1D/noh.yml HydroTests/Noh_1D/plotSolution.py HydroTests/Noh_1D/run.sh \ + HydroTests/Noh_2D/makeIC.py HydroTests/Noh_2D/noh.yml HydroTests/Noh_2D/plotSolution.py HydroTests/Noh_2D/run.sh HydroTests/Noh_2D/getGlass.sh \ + HydroTests/Noh_3D/makeIC.py HydroTests/Noh_3D/noh.yml HydroTests/Noh_3D/plotSolution.py HydroTests/Noh_3D/run.sh HydroTests/Noh_3D/getGlass.sh \ + HydroTests/PerturbedBox_2D/makeIC.py HydroTests/PerturbedBox_2D/perturbedPlane.yml \ + HydroTests/PerturbedBox_3D/makeIC.py HydroTests/PerturbedBox_3D/perturbedBox.yml HydroTests/PerturbedBox_3D/run.sh \ + PMillennium/PMillennium-384/p-mill-384.yml \ + PMillennium/PMillennium-768/p-mill-768.yml \ + PMillennium/PMillennium-1536/p-mill-1536.yml \ + SantaBarbara/SantaBarbara-256/README SantaBarbara/SantaBarbara-256/getIC.sh SantaBarbara/SantaBarbara-256/santa_barbara.yml SantaBarbara/SantaBarbara-256/run.sh \ + SantaBarbara/SantaBarbara-128/README SantaBarbara/SantaBarbara-128/getIC.sh SantaBarbara/SantaBarbara-128/santa_barbara.yml SantaBarbara/SantaBarbara-128/run.sh \ + HydroTests/SedovBlast_1D/makeIC.py HydroTests/SedovBlast_1D/plotSolution.py HydroTests/SedovBlast_1D/run.sh HydroTests/SedovBlast_1D/sedov.yml \ + HydroTests/SedovBlast_2D/getGlass.sh HydroTests/SedovBlast_2D/makeIC.py HydroTests/SedovBlast_2D/plotSolution.py HydroTests/SedovBlast_2D/run.sh HydroTests/SedovBlast_2D/sedov.yml \ + HydroTests/SedovBlast_3D/getGlass.sh HydroTests/SedovBlast_3D/makeIC.py HydroTests/SedovBlast_3D/plotSolution.py HydroTests/SedovBlast_3D/run.sh HydroTests/SedovBlast_3D/sedov.yml \ + HydroTests/SineWavePotential_1D/makeIC.py HydroTests/SineWavePotential_1D/plotSolution.py HydroTests/SineWavePotential_1D/run.sh HydroTests/SineWavePotential_1D/sineWavePotential.yml \ + HydroTests/SineWavePotential_2D/makeIC.py HydroTests/SineWavePotential_2D/plotSolution.py HydroTests/SineWavePotential_2D/run.sh HydroTests/SineWavePotential_2D/sineWavePotential.yml \ + HydroTests/SineWavePotential_3D/makeIC.py HydroTests/SineWavePotential_3D/plotSolution.py HydroTests/SineWavePotential_3D/run.sh HydroTests/SineWavePotential_3D/sineWavePotential.yml \ + SmallCosmoVolume/SmallCosmoVolume_hydro/README SmallCosmoVolume/SmallCosmoVolume_hydro/getIC.sh SmallCosmoVolume/SmallCosmoVolume_hydro/run.sh SmallCosmoVolume/SmallCosmoVolume_hydro/small_cosmo_volume.yml SmallCosmoVolume/SmallCosmoVolume_hydro/plotTempEvolution.py \ + SmallCosmoVolume/SmallCosmoVolume_DM/README SmallCosmoVolume/SmallCosmoVolume_DM/getIC.sh SmallCosmoVolume/SmallCosmoVolume_DM/run.sh SmallCosmoVolume/SmallCosmoVolume_DM/small_cosmo_volume_dm.yml SmallCosmoVolume/SmallCosmoVolume_DM/stf_input_6dfof_dmonly_sub.cfg \ + HydroTests/SodShock_1D/makeIC.py HydroTests/SodShock_1D/plotSolution.py HydroTests/SodShock_1D/run.sh HydroTests/SodShock_1D/sodShock.yml \ + HydroTests/SodShock_2D/getGlass.sh HydroTests/SodShock_2D/makeIC.py HydroTests/SodShock_2D/plotSolution.py HydroTests/SodShock_2D/run.sh HydroTests/SodShock_2D/sodShock.yml \ + HydroTests/SodShock_3D/getGlass.sh HydroTests/SodShock_3D/makeIC.py HydroTests/SodShock_3D/plotSolution.py HydroTests/SodShock_3D/run.sh HydroTests/SodShock_3D/sodShock.yml \ + HydroTests/SquareTest_2D/makeIC.py HydroTests/SquareTest_2D/plotSolution.py HydroTests/SquareTest_2D/run.sh HydroTests/SquareTest_2D/square.yml \ + HydroTests/UniformBox_2D/makeIC.py HydroTests/UniformBox_2D/run.sh HydroTests/UniformBox_2D/uniformPlane.yml \ + HydroTests/UniformBox_3D/makeICbig.py HydroTests/UniformBox_3D/makeIC.py HydroTests/UniformBox_3D/run.sh HydroTests/UniformBox_3D/uniformBox.yml \ + Cosmology/ZeldovichPancake_3D/makeIC.py Cosmology/ZeldovichPancake_3D/zeldovichPancake.yml Cosmology/ZeldovichPancake_3D/run.sh Cosmology/ZeldovichPancake_3D/plotSolution.py # Default parameter file EXTRA_DIST += parameter_example.yml