This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by SWIFT configure 2025.04, which was generated by GNU Autoconf 2.69. Invocation command line was $ ./configure --disable-optimization ## --------- ## ## Platform. ## ## --------- ## hostname = ga003.pri.cosma.local uname -m = x86_64 uname -r = 5.14.0-427.37.1.el9_4.x86_64 uname -s = Linux uname -v = #1 SMP PREEMPT_DYNAMIC Wed Sep 25 11:51:41 UTC 2024 /usr/bin/uname -p = x86_64 /bin/uname -X = unknown /bin/arch = x86_64 /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /cosma/local/llvm/18.1.8/bin PATH: /cosma/local/gadgetviewer/1.2.0/bin PATH: /cosma/local/hdfview/HDFView/3.3.2/bin PATH: /cosma/local/arm/forge/23.1.0/bin PATH: /cosma/local/Python/3.12.4/bin PATH: /cosma/local/bin/system PATH: /cosma/local/bin PATH: /cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/bin PATH: /cosma/local/hdf5//gnu_14.1.0/1.14.4/bin PATH: /cosma/local/gsl/2.8/bin PATH: /cosma/local/openmpi/gnu_14.1.0/5.0.3/bin PATH: /cosma/local/gcc/14.1.0/bin PATH: /cosma/local/Modules/default/bin PATH: /usr/local/sbin PATH: /usr/local/bin PATH: /usr/sbin PATH: /usr/bin ## ----------- ## ## Core tests. ## ## ----------- ## configure:3236: checking for a BSD-compatible install configure:3304: result: /usr/bin/install -c configure:3315: checking whether build environment is sane configure:3370: result: yes configure:3521: checking for a thread-safe mkdir -p configure:3560: result: /usr/bin/mkdir -p configure:3567: checking for gawk configure:3583: found /usr/bin/gawk configure:3594: result: gawk configure:3605: checking whether make sets $(MAKE) configure:3627: result: yes configure:3656: checking whether make supports nested variables configure:3673: result: yes configure:3814: checking whether to enable debugging configure:3876: result: no configure:3903: checking whether make supports the include directive configure:3918: make -f confmf.GNU && cat confinc.out this is the am__doit target configure:3921: $? = 0 configure:3940: result: yes (GNU style) configure:4010: checking for gcc configure:4037: result: /cosma/local/gcc/14.1.0/bin/gcc configure:4266: checking for C compiler version configure:4275: /cosma/local/gcc/14.1.0/bin/gcc --version >&5 gcc (GCC) 14.1.0 Copyright (C) 2024 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:4286: $? = 0 configure:4275: /cosma/local/gcc/14.1.0/bin/gcc -v >&5 Using built-in specs. COLLECT_GCC=/cosma/local/gcc/14.1.0/bin/gcc COLLECT_LTO_WRAPPER=/cosma/local/gcc/14.1.0/libexec/gcc/x86_64-pc-linux-gnu/14.1.0/lto-wrapper Target: x86_64-pc-linux-gnu Configured with: ../configure --prefix=/cosma/local/gcc/14.1.0 --enable-languages=c,c++,fortran --disable-multilib Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 14.1.0 (GCC) configure:4286: $? = 0 configure:4275: /cosma/local/gcc/14.1.0/bin/gcc -V >&5 gcc: error: unrecognized command-line option '-V' gcc: fatal error: no input files compilation terminated. configure:4286: $? = 1 configure:4275: /cosma/local/gcc/14.1.0/bin/gcc -qversion >&5 gcc: error: unrecognized command-line option '-qversion'; did you mean '--version'? gcc: fatal error: no input files compilation terminated. configure:4286: $? = 1 configure:4306: checking whether the C compiler works configure:4328: /cosma/local/gcc/14.1.0/bin/gcc -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ conftest.c >&5 configure:4332: $? = 0 configure:4380: result: yes configure:4383: checking for C compiler default output file name configure:4385: result: a.out configure:4391: checking for suffix of executables configure:4398: /cosma/local/gcc/14.1.0/bin/gcc -o conftest -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ conftest.c >&5 configure:4402: $? = 0 configure:4424: result: configure:4446: checking whether we are cross compiling configure:4454: /cosma/local/gcc/14.1.0/bin/gcc -o conftest -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ conftest.c >&5 configure:4458: $? = 0 configure:4465: ./conftest configure:4469: $? = 0 configure:4484: result: no configure:4489: checking for suffix of object files configure:4511: /cosma/local/gcc/14.1.0/bin/gcc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 configure:4515: $? = 0 configure:4536: result: o configure:4540: checking whether we are using the GNU C compiler configure:4559: /cosma/local/gcc/14.1.0/bin/gcc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 configure:4559: $? = 0 configure:4568: result: yes configure:4577: checking whether /cosma/local/gcc/14.1.0/bin/gcc accepts -g configure:4597: /cosma/local/gcc/14.1.0/bin/gcc -c -g -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 configure:4597: $? = 0 configure:4638: result: yes configure:4655: checking for /cosma/local/gcc/14.1.0/bin/gcc option to accept ISO C89 configure:4718: /cosma/local/gcc/14.1.0/bin/gcc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 configure:4718: $? = 0 configure:4731: result: none needed configure:4756: checking whether /cosma/local/gcc/14.1.0/bin/gcc understands -c and -o together configure:4778: /cosma/local/gcc/14.1.0/bin/gcc -c conftest.c -o conftest2.o configure:4781: $? = 0 configure:4778: /cosma/local/gcc/14.1.0/bin/gcc -c conftest.c -o conftest2.o configure:4781: $? = 0 configure:4793: result: yes configure:4812: checking dependency style of /cosma/local/gcc/14.1.0/bin/gcc configure:4923: result: gcc3 configure:4944: checking how to run the C preprocessor configure:4975: /cosma/local/gcc/14.1.0/bin/gcc -E -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c configure:4975: $? = 0 configure:4989: /cosma/local/gcc/14.1.0/bin/gcc -E -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c conftest.c:11:10: fatal error: ac_nonexistent.h: No such file or directory 11 | #include | ^~~~~~~~~~~~~~~~~~ compilation terminated. configure:4989: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "SWIFT" | #define PACKAGE_TARNAME "swift" | #define PACKAGE_VERSION "2025.04" | #define PACKAGE_STRING "SWIFT 2025.04" | #define PACKAGE_BUGREPORT "https://gitlab.cosma.dur.ac.uk/swift/swiftsim" | #define PACKAGE_URL "" | #define PACKAGE "swift" | #define VERSION "2025.04" | /* end confdefs.h. */ | #include configure:5014: result: /cosma/local/gcc/14.1.0/bin/gcc -E configure:5034: /cosma/local/gcc/14.1.0/bin/gcc -E -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c configure:5034: $? = 0 configure:5048: /cosma/local/gcc/14.1.0/bin/gcc -E -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c conftest.c:11:10: fatal error: ac_nonexistent.h: No such file or directory 11 | #include | ^~~~~~~~~~~~~~~~~~ compilation terminated. configure:5048: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "SWIFT" | #define PACKAGE_TARNAME "swift" | #define PACKAGE_VERSION "2025.04" | #define PACKAGE_STRING "SWIFT 2025.04" | #define PACKAGE_BUGREPORT "https://gitlab.cosma.dur.ac.uk/swift/swiftsim" | #define PACKAGE_URL "" | #define PACKAGE "swift" | #define VERSION "2025.04" | /* end confdefs.h. */ | #include configure:5077: checking for grep that handles long lines and -e configure:5135: result: /usr/bin/grep configure:5140: checking for egrep configure:5202: result: /usr/bin/grep -E configure:5207: checking for ANSI C header files configure:5227: /cosma/local/gcc/14.1.0/bin/gcc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 configure:5227: $? = 0 configure:5300: /cosma/local/gcc/14.1.0/bin/gcc -o conftest -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ conftest.c >&5 configure:5300: $? = 0 configure:5300: ./conftest configure:5300: $? = 0 configure:5311: result: yes configure:5324: checking for sys/types.h configure:5324: /cosma/local/gcc/14.1.0/bin/gcc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 configure:5324: $? = 0 configure:5324: result: yes configure:5324: checking for sys/stat.h configure:5324: /cosma/local/gcc/14.1.0/bin/gcc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 configure:5324: $? = 0 configure:5324: result: yes configure:5324: checking for stdlib.h configure:5324: /cosma/local/gcc/14.1.0/bin/gcc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 configure:5324: $? = 0 configure:5324: result: yes configure:5324: checking for string.h configure:5324: /cosma/local/gcc/14.1.0/bin/gcc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 configure:5324: $? = 0 configure:5324: result: yes configure:5324: checking for memory.h configure:5324: /cosma/local/gcc/14.1.0/bin/gcc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 configure:5324: $? = 0 configure:5324: result: yes configure:5324: checking for strings.h configure:5324: /cosma/local/gcc/14.1.0/bin/gcc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 configure:5324: $? = 0 configure:5324: result: yes configure:5324: checking for inttypes.h configure:5324: /cosma/local/gcc/14.1.0/bin/gcc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 configure:5324: $? = 0 configure:5324: result: yes configure:5324: checking for stdint.h configure:5324: /cosma/local/gcc/14.1.0/bin/gcc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 configure:5324: $? = 0 configure:5324: result: yes configure:5324: checking for unistd.h configure:5324: /cosma/local/gcc/14.1.0/bin/gcc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 configure:5324: $? = 0 configure:5324: result: yes configure:5337: checking minix/config.h usability configure:5337: /cosma/local/gcc/14.1.0/bin/gcc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 conftest.c:54:10: fatal error: minix/config.h: No such file or directory 54 | #include | ^~~~~~~~~~~~~~~~ compilation terminated. configure:5337: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "SWIFT" | #define PACKAGE_TARNAME "swift" | #define PACKAGE_VERSION "2025.04" | #define PACKAGE_STRING "SWIFT 2025.04" | #define PACKAGE_BUGREPORT "https://gitlab.cosma.dur.ac.uk/swift/swiftsim" | #define PACKAGE_URL "" | #define PACKAGE "swift" | #define VERSION "2025.04" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:5337: result: no configure:5337: checking minix/config.h presence configure:5337: /cosma/local/gcc/14.1.0/bin/gcc -E -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c conftest.c:21:10: fatal error: minix/config.h: No such file or directory 21 | #include | ^~~~~~~~~~~~~~~~ compilation terminated. configure:5337: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "SWIFT" | #define PACKAGE_TARNAME "swift" | #define PACKAGE_VERSION "2025.04" | #define PACKAGE_STRING "SWIFT 2025.04" | #define PACKAGE_BUGREPORT "https://gitlab.cosma.dur.ac.uk/swift/swiftsim" | #define PACKAGE_URL "" | #define PACKAGE "swift" | #define VERSION "2025.04" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | /* end confdefs.h. */ | #include configure:5337: result: no configure:5337: checking for minix/config.h configure:5337: result: no configure:5358: checking whether it is safe to define __EXTENSIONS__ configure:5376: /cosma/local/gcc/14.1.0/bin/gcc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 configure:5376: $? = 0 configure:5383: result: yes configure:5445: checking for gcc configure:5472: result: /cosma/local/gcc/14.1.0/bin/gcc configure:5701: checking for C compiler version configure:5710: /cosma/local/gcc/14.1.0/bin/gcc --version >&5 gcc (GCC) 14.1.0 Copyright (C) 2024 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:5721: $? = 0 configure:5710: /cosma/local/gcc/14.1.0/bin/gcc -v >&5 Using built-in specs. COLLECT_GCC=/cosma/local/gcc/14.1.0/bin/gcc COLLECT_LTO_WRAPPER=/cosma/local/gcc/14.1.0/libexec/gcc/x86_64-pc-linux-gnu/14.1.0/lto-wrapper Target: x86_64-pc-linux-gnu Configured with: ../configure --prefix=/cosma/local/gcc/14.1.0 --enable-languages=c,c++,fortran --disable-multilib Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 14.1.0 (GCC) configure:5721: $? = 0 configure:5710: /cosma/local/gcc/14.1.0/bin/gcc -V >&5 gcc: error: unrecognized command-line option '-V' gcc: fatal error: no input files compilation terminated. configure:5721: $? = 1 configure:5710: /cosma/local/gcc/14.1.0/bin/gcc -qversion >&5 gcc: error: unrecognized command-line option '-qversion'; did you mean '--version'? gcc: fatal error: no input files compilation terminated. configure:5721: $? = 1 configure:5725: checking whether we are using the GNU C compiler configure:5753: result: yes configure:5762: checking whether /cosma/local/gcc/14.1.0/bin/gcc accepts -g configure:5823: result: yes configure:5840: checking for /cosma/local/gcc/14.1.0/bin/gcc option to accept ISO C89 configure:5916: result: none needed configure:5941: checking whether /cosma/local/gcc/14.1.0/bin/gcc understands -c and -o together configure:5978: result: yes configure:5997: checking dependency style of /cosma/local/gcc/14.1.0/bin/gcc configure:6108: result: gcc3 configure:6128: checking for OpenMP flag of C compiler configure:6173: /cosma/local/gcc/14.1.0/bin/gcc -o conftest -qopenmp -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ conftest.c >&5 gcc: error: unrecognized command-line option '-qopenmp'; did you mean '-Wopenmp'? configure:6173: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "SWIFT" | #define PACKAGE_TARNAME "swift" | #define PACKAGE_VERSION "2025.04" | #define PACKAGE_STRING "SWIFT 2025.04" | #define PACKAGE_BUGREPORT "https://gitlab.cosma.dur.ac.uk/swift/swiftsim" | #define PACKAGE_URL "" | #define PACKAGE "swift" | #define VERSION "2025.04" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | /* end confdefs.h. */ | | #include | | static void | parallel_fill(int * data, int n) | { | int i; | #pragma omp parallel for | for (i = 0; i < n; ++i) | data[i] = i; | } | | int | main() | { | int arr[100000]; | omp_set_num_threads(2); | parallel_fill(arr, 100000); | return 0; | } | configure:6173: /cosma/local/gcc/14.1.0/bin/gcc -o conftest -fopenmp -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ conftest.c >&5 configure:6173: $? = 0 configure:6182: result: -fopenmp configure:6214: checking for C compiler vendor configure:6272: /cosma/local/gcc/14.1.0/bin/gcc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 conftest.c: In function 'main': conftest.c:34:7: error: 'thisisanerror' undeclared (first use in this function) 34 | thisisanerror; | ^~~~~~~~~~~~~ conftest.c:34:7: note: each undeclared identifier is reported only once for each function it appears in configure:6272: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "SWIFT" | #define PACKAGE_TARNAME "swift" | #define PACKAGE_VERSION "2025.04" | #define PACKAGE_STRING "SWIFT 2025.04" | #define PACKAGE_BUGREPORT "https://gitlab.cosma.dur.ac.uk/swift/swiftsim" | #define PACKAGE_URL "" | #define PACKAGE "swift" | #define VERSION "2025.04" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define HAVE_OPENMP 1 | #define _GLIBCXX_INCLUDE_NEXT_C_HEADERS 1 | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(__ICC) || defined(__ECC) || defined(__INTEL_COMPILER)) | thisisanerror; | #endif | | ; | return 0; | } configure:6272: /cosma/local/gcc/14.1.0/bin/gcc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 conftest.c: In function 'main': conftest.c:34:7: error: 'thisisanerror' undeclared (first use in this function) 34 | thisisanerror; | ^~~~~~~~~~~~~ conftest.c:34:7: note: each undeclared identifier is reported only once for each function it appears in configure:6272: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "SWIFT" | #define PACKAGE_TARNAME "swift" | #define PACKAGE_VERSION "2025.04" | #define PACKAGE_STRING "SWIFT 2025.04" | #define PACKAGE_BUGREPORT "https://gitlab.cosma.dur.ac.uk/swift/swiftsim" | #define PACKAGE_URL "" | #define PACKAGE "swift" | #define VERSION "2025.04" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define HAVE_OPENMP 1 | #define _GLIBCXX_INCLUDE_NEXT_C_HEADERS 1 | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(__INTEL_LLVM_COMPILER)) | thisisanerror; | #endif | | ; | return 0; | } configure:6272: /cosma/local/gcc/14.1.0/bin/gcc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 conftest.c: In function 'main': conftest.c:34:7: error: 'thisisanerror' undeclared (first use in this function) 34 | thisisanerror; | ^~~~~~~~~~~~~ conftest.c:34:7: note: each undeclared identifier is reported only once for each function it appears in configure:6272: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "SWIFT" | #define PACKAGE_TARNAME "swift" | #define PACKAGE_VERSION "2025.04" | #define PACKAGE_STRING "SWIFT 2025.04" | #define PACKAGE_BUGREPORT "https://gitlab.cosma.dur.ac.uk/swift/swiftsim" | #define PACKAGE_URL "" | #define PACKAGE "swift" | #define VERSION "2025.04" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define HAVE_OPENMP 1 | #define _GLIBCXX_INCLUDE_NEXT_C_HEADERS 1 | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(__xlc__) || defined(__xlC__) || defined(__IBMC__) || defined(__IBMCPP__) || defined(__ibmxl__)) | thisisanerror; | #endif | | ; | return 0; | } configure:6272: /cosma/local/gcc/14.1.0/bin/gcc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 conftest.c: In function 'main': conftest.c:34:7: error: 'thisisanerror' undeclared (first use in this function) 34 | thisisanerror; | ^~~~~~~~~~~~~ conftest.c:34:7: note: each undeclared identifier is reported only once for each function it appears in configure:6272: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "SWIFT" | #define PACKAGE_TARNAME "swift" | #define PACKAGE_VERSION "2025.04" | #define PACKAGE_STRING "SWIFT 2025.04" | #define PACKAGE_BUGREPORT "https://gitlab.cosma.dur.ac.uk/swift/swiftsim" | #define PACKAGE_URL "" | #define PACKAGE "swift" | #define VERSION "2025.04" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define HAVE_OPENMP 1 | #define _GLIBCXX_INCLUDE_NEXT_C_HEADERS 1 | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(__PATHCC__) || defined(__PATHSCALE__)) | thisisanerror; | #endif | | ; | return 0; | } configure:6272: /cosma/local/gcc/14.1.0/bin/gcc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 conftest.c: In function 'main': conftest.c:34:7: error: 'thisisanerror' undeclared (first use in this function) 34 | thisisanerror; | ^~~~~~~~~~~~~ conftest.c:34:7: note: each undeclared identifier is reported only once for each function it appears in configure:6272: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "SWIFT" | #define PACKAGE_TARNAME "swift" | #define PACKAGE_VERSION "2025.04" | #define PACKAGE_STRING "SWIFT 2025.04" | #define PACKAGE_BUGREPORT "https://gitlab.cosma.dur.ac.uk/swift/swiftsim" | #define PACKAGE_URL "" | #define PACKAGE "swift" | #define VERSION "2025.04" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define HAVE_OPENMP 1 | #define _GLIBCXX_INCLUDE_NEXT_C_HEADERS 1 | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(__clang__)) | thisisanerror; | #endif | | ; | return 0; | } configure:6272: /cosma/local/gcc/14.1.0/bin/gcc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 conftest.c: In function 'main': conftest.c:34:7: error: 'thisisanerror' undeclared (first use in this function) 34 | thisisanerror; | ^~~~~~~~~~~~~ conftest.c:34:7: note: each undeclared identifier is reported only once for each function it appears in configure:6272: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "SWIFT" | #define PACKAGE_TARNAME "swift" | #define PACKAGE_VERSION "2025.04" | #define PACKAGE_STRING "SWIFT 2025.04" | #define PACKAGE_BUGREPORT "https://gitlab.cosma.dur.ac.uk/swift/swiftsim" | #define PACKAGE_URL "" | #define PACKAGE "swift" | #define VERSION "2025.04" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define HAVE_OPENMP 1 | #define _GLIBCXX_INCLUDE_NEXT_C_HEADERS 1 | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(_CRAYC)) | thisisanerror; | #endif | | ; | return 0; | } configure:6272: /cosma/local/gcc/14.1.0/bin/gcc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 conftest.c: In function 'main': conftest.c:34:7: error: 'thisisanerror' undeclared (first use in this function) 34 | thisisanerror; | ^~~~~~~~~~~~~ conftest.c:34:7: note: each undeclared identifier is reported only once for each function it appears in configure:6272: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "SWIFT" | #define PACKAGE_TARNAME "swift" | #define PACKAGE_VERSION "2025.04" | #define PACKAGE_STRING "SWIFT 2025.04" | #define PACKAGE_BUGREPORT "https://gitlab.cosma.dur.ac.uk/swift/swiftsim" | #define PACKAGE_URL "" | #define PACKAGE "swift" | #define VERSION "2025.04" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define HAVE_OPENMP 1 | #define _GLIBCXX_INCLUDE_NEXT_C_HEADERS 1 | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(__FUJITSU)) | thisisanerror; | #endif | | ; | return 0; | } configure:6272: /cosma/local/gcc/14.1.0/bin/gcc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 conftest.c: In function 'main': conftest.c:34:7: error: 'thisisanerror' undeclared (first use in this function) 34 | thisisanerror; | ^~~~~~~~~~~~~ conftest.c:34:7: note: each undeclared identifier is reported only once for each function it appears in configure:6272: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "SWIFT" | #define PACKAGE_TARNAME "swift" | #define PACKAGE_VERSION "2025.04" | #define PACKAGE_STRING "SWIFT 2025.04" | #define PACKAGE_BUGREPORT "https://gitlab.cosma.dur.ac.uk/swift/swiftsim" | #define PACKAGE_URL "" | #define PACKAGE "swift" | #define VERSION "2025.04" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define HAVE_OPENMP 1 | #define _GLIBCXX_INCLUDE_NEXT_C_HEADERS 1 | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(SDCC) || defined(__SDCC)) | thisisanerror; | #endif | | ; | return 0; | } configure:6272: /cosma/local/gcc/14.1.0/bin/gcc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 conftest.c: In function 'main': conftest.c:34:7: error: 'thisisanerror' undeclared (first use in this function) 34 | thisisanerror; | ^~~~~~~~~~~~~ conftest.c:34:7: note: each undeclared identifier is reported only once for each function it appears in configure:6272: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "SWIFT" | #define PACKAGE_TARNAME "swift" | #define PACKAGE_VERSION "2025.04" | #define PACKAGE_STRING "SWIFT 2025.04" | #define PACKAGE_BUGREPORT "https://gitlab.cosma.dur.ac.uk/swift/swiftsim" | #define PACKAGE_URL "" | #define PACKAGE "swift" | #define VERSION "2025.04" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define HAVE_OPENMP 1 | #define _GLIBCXX_INCLUDE_NEXT_C_HEADERS 1 | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(_SX)) | thisisanerror; | #endif | | ; | return 0; | } configure:6272: /cosma/local/gcc/14.1.0/bin/gcc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 conftest.c: In function 'main': conftest.c:34:7: error: 'thisisanerror' undeclared (first use in this function) 34 | thisisanerror; | ^~~~~~~~~~~~~ conftest.c:34:7: note: each undeclared identifier is reported only once for each function it appears in configure:6272: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "SWIFT" | #define PACKAGE_TARNAME "swift" | #define PACKAGE_VERSION "2025.04" | #define PACKAGE_STRING "SWIFT 2025.04" | #define PACKAGE_BUGREPORT "https://gitlab.cosma.dur.ac.uk/swift/swiftsim" | #define PACKAGE_URL "" | #define PACKAGE "swift" | #define VERSION "2025.04" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define HAVE_OPENMP 1 | #define _GLIBCXX_INCLUDE_NEXT_C_HEADERS 1 | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(__PGI)) | thisisanerror; | #endif | | ; | return 0; | } configure:6272: /cosma/local/gcc/14.1.0/bin/gcc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 configure:6272: $? = 0 configure:6281: result: gnu configure:6284: checking for a sed that does not truncate output configure:6348: result: /usr/bin/sed configure:6355: checking for C compiler version configure:6607: /cosma/local/gcc/14.1.0/bin/gcc -o conftest -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ conftest.c >&5 configure:6607: $? = 0 configure:6607: ./conftest configure:6607: $? = 0 configure:6616: /cosma/local/gcc/14.1.0/bin/gcc -o conftest -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ conftest.c >&5 configure:6616: $? = 0 configure:6616: ./conftest configure:6616: $? = 0 configure:6625: /cosma/local/gcc/14.1.0/bin/gcc -o conftest -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ conftest.c >&5 configure:6625: $? = 0 configure:6625: ./conftest configure:6625: $? = 0 configure:7342: result: 14.1.0 configure:7387: checking for C/C++ restrict keyword configure:7412: /cosma/local/gcc/14.1.0/bin/gcc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 configure:7412: $? = 0 configure:7420: result: __restrict configure:7526: WARNING: Interprocedural optimization support default is changed to false configure:7923: checking for mpicc configure:7939: found /cosma/local/openmpi/gnu_14.1.0/5.0.3/bin/mpicc configure:7950: result: mpicc configure:7968: checking for MPI_Init configure:7968: mpicc -o conftest -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ conftest.c >&5 configure:7968: $? = 0 configure:7968: result: yes configure:8061: checking for mpi.h configure:8074: mpicc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 configure:8074: $? = 0 configure:8075: result: yes configure:8110: checking for mpirun configure:8128: found /cosma/local/openmpi/gnu_14.1.0/5.0.3/bin/mpirun configure:8141: result: /cosma/local/openmpi/gnu_14.1.0/5.0.3/bin/mpirun configure:8161: checking MPI threads options configure:8180: result: Open MPI configure:8258: WARNING: Libtool does not cope well with whitespace in `pwd` configure:8285: checking build system type configure:8299: result: x86_64-pc-linux-gnu configure:8319: checking host system type configure:8332: result: x86_64-pc-linux-gnu configure:8373: checking how to print strings configure:8400: result: printf configure:8421: checking for a sed that does not truncate output configure:8485: result: /usr/bin/sed configure:8503: checking for fgrep configure:8565: result: /usr/bin/grep -F configure:8600: checking for ld used by mpicc configure:8667: result: /usr/bin/ld configure:8674: checking if the linker (/usr/bin/ld) is GNU ld configure:8689: result: yes configure:8701: checking for BSD- or MS-compatible name lister (nm) configure:8755: result: /usr/bin/nm -B configure:8885: checking the name lister (/usr/bin/nm -B) interface configure:8892: mpicc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 configure:8895: /usr/bin/nm -B "conftest.o" configure:8898: output 0000000000000000 B some_variable configure:8905: result: BSD nm configure:8908: checking whether ln -s works configure:8912: result: yes configure:8920: checking the maximum length of command line arguments configure:9051: result: 4718592 configure:9099: checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format configure:9139: result: func_convert_file_noop configure:9146: checking how to convert x86_64-pc-linux-gnu file names to toolchain format configure:9166: result: func_convert_file_noop configure:9173: checking for /usr/bin/ld option to reload object files configure:9180: result: -r configure:9254: checking for objdump configure:9270: found /usr/bin/objdump configure:9281: result: objdump configure:9313: checking how to recognize dependent libraries configure:9513: result: pass_all configure:9598: checking for dlltool configure:9628: result: no configure:9658: checking how to associate runtime and link libraries configure:9685: result: printf %s\n configure:9745: checking for ar configure:9761: found /usr/bin/ar configure:9772: result: ar configure:9809: checking for archiver @FILE support configure:9826: mpicc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 configure:9826: $? = 0 configure:9829: ar cru libconftest.a @conftest.lst >&5 configure:9832: $? = 0 configure:9837: ar cru libconftest.a @conftest.lst >&5 ar: conftest.o: No such file or directory configure:9840: $? = 1 configure:9852: result: @ configure:9910: checking for strip configure:9926: found /usr/bin/strip configure:9937: result: strip configure:10009: checking for ranlib configure:10025: found /usr/bin/ranlib configure:10036: result: ranlib configure:10138: checking command to parse /usr/bin/nm -B output from mpicc object configure:10291: mpicc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 configure:10294: $? = 0 configure:10298: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm configure:10301: $? = 0 configure:10367: mpicc -o conftest -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ conftest.c conftstm.o >&5 configure:10370: $? = 0 configure:10408: result: ok configure:10455: checking for sysroot configure:10485: result: no configure:10492: checking for a working dd configure:10530: result: /usr/bin/dd configure:10534: checking how to truncate binary pipes configure:10549: result: /usr/bin/dd bs=4096 count=1 configure:10685: mpicc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 configure:10688: $? = 0 configure:10878: checking for mt configure:10908: result: no configure:10928: checking if : is a manifest tool configure:10934: : '-?' configure:10942: result: no configure:11616: checking for dlfcn.h configure:11616: mpicc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 configure:11616: $? = 0 configure:11616: result: yes configure:11871: checking for objdir configure:11886: result: .libs configure:12150: checking if mpicc supports -fno-rtti -fno-exceptions configure:12168: mpicc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -fno-rtti -fno-exceptions conftest.c >&5 cc1: warning: command-line option '-fno-rtti' is valid for C++/D/ObjC++ but not for C configure:12172: $? = 0 configure:12185: result: no configure:12543: checking for mpicc option to produce PIC configure:12550: result: -fPIC -DPIC configure:12558: checking if mpicc PIC flag -fPIC -DPIC works configure:12576: mpicc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -fPIC -DPIC -DPIC conftest.c >&5 configure:12580: $? = 0 configure:12593: result: yes configure:12622: checking if mpicc static flag -static works configure:12650: result: no configure:12665: checking if mpicc supports -c -o file.o configure:12686: mpicc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -o out/conftest2.o conftest.c >&5 configure:12690: $? = 0 configure:12712: result: yes configure:12720: checking if mpicc supports -c -o file.o configure:12767: result: yes configure:12800: checking whether the mpicc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:14059: result: yes configure:14299: checking dynamic linker characteristics configure:14880: mpicc -o conftest -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath -Wl,/foo conftest.c >&5 configure:14880: $? = 0 configure:15120: result: GNU/Linux ld.so configure:15242: checking how to hardcode library paths into programs configure:15267: result: immediate configure:15815: checking whether stripping libraries is possible configure:15820: result: yes configure:15855: checking if libtool supports shared libraries configure:15857: result: yes configure:15860: checking whether to build shared libraries configure:15885: result: no configure:15888: checking whether to build static libraries configure:15892: result: yes configure:15931: checking for mpicc option to accept ISO C99 configure:16080: mpicc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 configure:16080: $? = 0 configure:16093: result: none needed configure:16110: checking for inline configure:16126: mpicc -c -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 configure:16126: $? = 0 configure:16134: result: inline configure:16558: checking for PMCCNTR_EL0 asm instruction on ARM v8.1a configure:16580: mpicc -o conftest -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ conftest.c >&5 conftest.c: Assembler messages: conftest.c:40: Error: no such instruction: `mrs %rax,PMCCNTR_EL0' configure:16580: $? = 1 configure: program exited with status 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "SWIFT" | #define PACKAGE_TARNAME "swift" | #define PACKAGE_VERSION "2025.04" | #define PACKAGE_STRING "SWIFT 2025.04" | #define PACKAGE_BUGREPORT "https://gitlab.cosma.dur.ac.uk/swift/swiftsim" | #define PACKAGE_URL "" | #define PACKAGE "swift" | #define VERSION "2025.04" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define HAVE_OPENMP 1 | #define _GLIBCXX_INCLUDE_NEXT_C_HEADERS 1 | #define restrict __restrict | #define HAVE_MPI 1 | #define SWIFT_MPI_LIBRARY "Open MPI" | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | | #include | | int | main() | { | uint64_t cc = 0; | __asm__ __volatile__("mrs %0, PMCCNTR_EL0" : "=r"(cc)); | return 0; | } | configure:16590: result: no configure:16598: checking for CNTVCT_EL0 asm instruction on ARM v8.1a configure:16620: mpicc -o conftest -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ conftest.c >&5 conftest.c: Assembler messages: conftest.c:40: Error: no such instruction: `mrs %rax,CNTVCT_EL0' configure:16620: $? = 1 configure: program exited with status 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "SWIFT" | #define PACKAGE_TARNAME "swift" | #define PACKAGE_VERSION "2025.04" | #define PACKAGE_STRING "SWIFT 2025.04" | #define PACKAGE_BUGREPORT "https://gitlab.cosma.dur.ac.uk/swift/swiftsim" | #define PACKAGE_URL "" | #define PACKAGE "swift" | #define VERSION "2025.04" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define HAVE_OPENMP 1 | #define _GLIBCXX_INCLUDE_NEXT_C_HEADERS 1 | #define restrict __restrict | #define HAVE_MPI 1 | #define SWIFT_MPI_LIBRARY "Open MPI" | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | | #include | | int | main() | { | uint64_t cc = 0; | __asm__ __volatile__("mrs %0, CNTVCT_EL0" : "=r"(cc)); | return 0; | } | configure:16630: result: no configure:16694: checking for working posix_memalign configure:16718: mpicc -o conftest -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ conftest.c >&5 configure:16718: $? = 0 configure:16718: ./conftest configure:16718: $? = 0 configure:16728: result: yes configure:19483: checking whether make sets $(MAKE) configure:19505: result: yes configure:19514: checking for egrep configure:19576: result: /usr/bin/grep -E configure:19584: checking for sqrt in -lm configure:19609: mpicc -o conftest -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ conftest.c -lm >&5 conftest.c:42:6: warning: conflicting types for built-in function 'sqrt'; expected 'double(double)' [-Wbuiltin-declaration-mismatch] 42 | char sqrt (); | ^~~~ conftest.c:1:1: note: 'sqrt' is declared in header '' 1 | /* confdefs.h */ configure:19609: $? = 0 configure:19618: result: yes configure:19655: checking for cblas_dgemm in -lgslcblas configure:19680: mpicc -o conftest -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ conftest.c -lgslcblas -lgsl -lgslcblas -lm >&5 configure:19680: $? = 0 configure:19689: result: yes configure:19701: checking for gsl_integration_qag in -lgsl configure:19726: mpicc -o conftest -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ conftest.c -lgsl -lgsl -lgslcblas -lm >&5 configure:19726: $? = 0 configure:19735: result: yes configure:19874: checking for __gmpz_inits in -lgmp configure:19899: mpicc -o conftest -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ conftest.c -lgmp -lgmp -lm >&5 configure:19899: $? = 0 configure:19908: result: yes configure:20142: checking whether mpicc is Clang configure:20167: result: no configure:20229: checking whether pthreads work with "-pthread" and "-lpthread" configure:20334: mpicc -o conftest -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ conftest.c -lpthread -lm >&5 configure:20334: $? = 0 configure:20343: result: yes configure:20460: checking for joinable pthread attribute configure:20478: mpicc -o conftest -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ conftest.c -lpthread -lm >&5 configure:20478: $? = 0 configure:20486: result: PTHREAD_CREATE_JOINABLE configure:20500: checking whether more special flags are required for pthreads configure:20513: result: no configure:20521: checking for PTHREAD_PRIO_INHERIT configure:20538: mpicc -o conftest -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ conftest.c -lpthread -lm >&5 configure:20538: $? = 0 configure:20547: result: yes configure:20712: checking for pthread_barrier_init in -lpthread configure:20737: mpicc -o conftest -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ -lpthread -lpthread -lm conftest.c -lpthread -lpthread -lm >&5 configure:20737: $? = 0 configure:20746: result: yes configure:20762: checking for posix_fallocate in -lpthread configure:20787: mpicc -o conftest -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ -lpthread -lpthread -lm conftest.c -lpthread -lpthread -lm >&5 configure:20787: $? = 0 configure:20796: result: yes configure:21175: checking for fftw_malloc in -lfftw3 configure:21200: mpicc -o conftest -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ -lpthread -lpthread -lm conftest.c -lfftw3 -lfftw3 -lpthread -lm >&5 configure:21200: $? = 0 configure:21209: result: yes configure:21290: checking for fftw_init_threads in -lfftw3 configure:21315: mpicc -o conftest -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ -lpthread -lpthread -lm conftest.c -lfftw3 -lfftw3_threads -lfftw3 -lpthread -lm >&5 configure:21315: $? = 0 configure:21324: result: yes configure:22185: checking for h5cc configure:22203: found /cosma/local/hdf5//gnu_14.1.0/1.14.4/bin/h5cc configure:22215: result: /cosma/local/hdf5//gnu_14.1.0/1.14.4/bin/h5cc configure:22232: checking for HDF5 type configure:22242: result: serial configure:22244: checking for HDF5 libraries configure:22340: checking for HDF5 libraries configure:22388: result: yes (version 1.14.4-3) configure:22405: checking for hdf5.h configure:22405: /cosma/local/gcc/14.1.0/bin/gcc -c -pthread -I/cosma/local/hdf5/gnu_14.1.0/1.14.4/include -I/cosma/local/gcc/14.1.0/include -I/cosma/local/software/hdf5/build/gnu_14.1.0/1.14.4/src/src/H5FDsubfiling conftest.c >&5 configure:22405: $? = 0 configure:22405: result: yes configure:22414: checking for H5Fcreate in -lhdf5 configure:22439: /cosma/local/gcc/14.1.0/bin/gcc -o conftest -pthread -I/cosma/local/hdf5/gnu_14.1.0/1.14.4/include -I/cosma/local/gcc/14.1.0/include -I/cosma/local/software/hdf5/build/gnu_14.1.0/1.14.4/src/src/H5FDsubfiling -L/cosma/local/hdf5/gnu_14.1.0/1.14.4/lib -L/cosma/local/gcc/14.1.0/lib64/ conftest.c -lhdf5 -lhdf5 -lz -ldl -lm >&5 configure:22439: $? = 0 configure:22448: result: yes configure:22460: checking for main in -lhdf5_hl configure:22479: /cosma/local/gcc/14.1.0/bin/gcc -o conftest -pthread -I/cosma/local/hdf5/gnu_14.1.0/1.14.4/include -I/cosma/local/gcc/14.1.0/include -I/cosma/local/software/hdf5/build/gnu_14.1.0/1.14.4/src/src/H5FDsubfiling -L/cosma/local/hdf5/gnu_14.1.0/1.14.4/lib -L/cosma/local/gcc/14.1.0/lib64/ conftest.c -lhdf5_hl -lhdf5 -lz -ldl -lm >&5 configure:22479: $? = 0 configure:22488: result: yes configure:22506: checking for matching HDF5 Fortran wrapper configure:22510: result: /cosma/local/hdf5//gnu_14.1.0/1.14.4/bin/h5fc configure:22581: checking for HDF5 parallel support configure:22596: mpicc -c -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -I/cosma/local/hdf5/gnu_14.1.0/1.14.4/include -I/cosma/local/gcc/14.1.0/include -I/cosma/local/software/hdf5/build/gnu_14.1.0/1.14.4/src/src/H5FDsubfiling conftest.c >&5 conftest.c:49:11: error: #error macro not defined 49 | # error macro not defined | ^~~~~ configure:22596: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "SWIFT" | #define PACKAGE_TARNAME "swift" | #define PACKAGE_VERSION "2025.04" | #define PACKAGE_STRING "SWIFT 2025.04" | #define PACKAGE_BUGREPORT "https://gitlab.cosma.dur.ac.uk/swift/swiftsim" | #define PACKAGE_URL "" | #define PACKAGE "swift" | #define VERSION "2025.04" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define HAVE_OPENMP 1 | #define _GLIBCXX_INCLUDE_NEXT_C_HEADERS 1 | #define restrict __restrict | #define HAVE_MPI 1 | #define SWIFT_MPI_LIBRARY "Open MPI" | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SWIFT_MEMUSE_STATM 1 | #define HAVE_POSIX_MEMALIGN 1 | #define HAVE_LIBM 1 | #define HAVE_LIBGSLCBLAS 1 | #define HAVE_LIBGSL 1 | #define HAVE_LIBGMP 1 | #define HAVE_PTHREAD_PRIO_INHERIT 1 | #define HAVE_PTHREAD_BARRIERS 1 | #define HAVE_POSIX_FALLOCATE 1 | #define HAVE_FFTW 1 | #define HAVE_THREADED_FFTW 1 | #define SWIFT_RANDOM_SEED_XOR 0 | #define HAVE_HDF5 1 | /* end confdefs.h. */ | | #include "hdf5.h" | #ifndef H5_HAVE_PARALLEL | # error macro not defined | #endif | configure:22608: result: no configure:22642: checking for llapi_obd_statfs in -llustreapi configure:22667: mpicc -o conftest -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ -lpthread -lpthread -lm conftest.c -llustreapi -llustreapi -lpthread -lm >&5 configure:22667: $? = 0 configure:22676: result: yes configure:27439: checking for feenableexcept configure:27439: mpicc -o conftest -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ -lpthread -lpthread -lm conftest.c -lpthread -lm >&5 configure:27439: $? = 0 configure:27439: result: yes configure:27462: checking for pthread_setaffinity_np configure:27462: mpicc -o conftest -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ -lpthread -lpthread -lm conftest.c -lpthread -lm >&5 configure:27462: $? = 0 configure:27462: result: yes configure:27505: checking numa.h usability configure:27505: mpicc -c -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 configure:27505: $? = 0 configure:27505: result: yes configure:27505: checking numa.h presence configure:27505: /cosma/local/gcc/14.1.0/bin/gcc -E -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c configure:27505: $? = 0 configure:27505: result: yes configure:27505: checking for numa.h configure:27505: result: yes configure:27562: checking for numa_available in -lnuma configure:27587: mpicc -o conftest -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ -lpthread -lpthread -lm conftest.c -lnuma -lnuma -lpthread -lm >&5 configure:27587: $? = 0 configure:27596: result: yes configure:28324: checking for immintrin.h configure:28324: mpicc -c -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 configure:28324: $? = 0 configure:28324: result: yes configure:28340: checking for altivec.h configure:28340: mpicc -c -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 conftest.c:56:10: fatal error: altivec.h: No such file or directory 56 | #include | ^~~~~~~~~~~ compilation terminated. configure:28340: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "SWIFT" | #define PACKAGE_TARNAME "swift" | #define PACKAGE_VERSION "2025.04" | #define PACKAGE_STRING "SWIFT 2025.04" | #define PACKAGE_BUGREPORT "https://gitlab.cosma.dur.ac.uk/swift/swiftsim" | #define PACKAGE_URL "" | #define PACKAGE "swift" | #define VERSION "2025.04" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define HAVE_OPENMP 1 | #define _GLIBCXX_INCLUDE_NEXT_C_HEADERS 1 | #define restrict __restrict | #define HAVE_MPI 1 | #define SWIFT_MPI_LIBRARY "Open MPI" | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SWIFT_MEMUSE_STATM 1 | #define HAVE_POSIX_MEMALIGN 1 | #define HAVE_LIBM 1 | #define HAVE_LIBGSLCBLAS 1 | #define HAVE_LIBGSL 1 | #define HAVE_LIBGMP 1 | #define HAVE_PTHREAD_PRIO_INHERIT 1 | #define HAVE_PTHREAD_BARRIERS 1 | #define HAVE_POSIX_FALLOCATE 1 | #define HAVE_FFTW 1 | #define HAVE_THREADED_FFTW 1 | #define SWIFT_RANDOM_SEED_XOR 0 | #define HAVE_HDF5 1 | #define HAVE_LUSTREAPI 1 | #define HAVE_FE_ENABLE_EXCEPT 1 | #define HAVE_SETAFFINITY 1 | #define HAVE_LIBNUMA 1 | #define HAVE_IMMINTRIN_H 1 | /* end confdefs.h. */ | #ifdef HAVE_ALTIVEC_H | # include | #endif | | | #include configure:28340: result: no configure:28362: checking for sys/time.h configure:28362: mpicc -c -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 configure:28362: $? = 0 configure:28362: result: yes configure:28384: checking for sys/time.h configure:28384: result: yes configure:28400: checking for c_asm.h configure:28400: mpicc -c -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 conftest.c:59:10: fatal error: c_asm.h: No such file or directory 59 | #include | ^~~~~~~~~ compilation terminated. configure:28400: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "SWIFT" | #define PACKAGE_TARNAME "swift" | #define PACKAGE_VERSION "2025.04" | #define PACKAGE_STRING "SWIFT 2025.04" | #define PACKAGE_BUGREPORT "https://gitlab.cosma.dur.ac.uk/swift/swiftsim" | #define PACKAGE_URL "" | #define PACKAGE "swift" | #define VERSION "2025.04" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define HAVE_OPENMP 1 | #define _GLIBCXX_INCLUDE_NEXT_C_HEADERS 1 | #define restrict __restrict | #define HAVE_MPI 1 | #define SWIFT_MPI_LIBRARY "Open MPI" | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SWIFT_MEMUSE_STATM 1 | #define HAVE_POSIX_MEMALIGN 1 | #define HAVE_LIBM 1 | #define HAVE_LIBGSLCBLAS 1 | #define HAVE_LIBGSL 1 | #define HAVE_LIBGMP 1 | #define HAVE_PTHREAD_PRIO_INHERIT 1 | #define HAVE_PTHREAD_BARRIERS 1 | #define HAVE_POSIX_FALLOCATE 1 | #define HAVE_FFTW 1 | #define HAVE_THREADED_FFTW 1 | #define SWIFT_RANDOM_SEED_XOR 0 | #define HAVE_HDF5 1 | #define HAVE_LUSTREAPI 1 | #define HAVE_FE_ENABLE_EXCEPT 1 | #define HAVE_SETAFFINITY 1 | #define HAVE_LIBNUMA 1 | #define HAVE_IMMINTRIN_H 1 | #define HAVE_SYS_TIME_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_SYS_TIME_H 1 | /* end confdefs.h. */ | #ifdef HAVE_C_ASM_H | # include | #endif | | | #include configure:28400: result: no configure:28416: checking for intrinsics.h configure:28416: mpicc -c -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 conftest.c:59:10: fatal error: intrinsics.h: No such file or directory 59 | #include | ^~~~~~~~~~~~~~ compilation terminated. configure:28416: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "SWIFT" | #define PACKAGE_TARNAME "swift" | #define PACKAGE_VERSION "2025.04" | #define PACKAGE_STRING "SWIFT 2025.04" | #define PACKAGE_BUGREPORT "https://gitlab.cosma.dur.ac.uk/swift/swiftsim" | #define PACKAGE_URL "" | #define PACKAGE "swift" | #define VERSION "2025.04" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define HAVE_OPENMP 1 | #define _GLIBCXX_INCLUDE_NEXT_C_HEADERS 1 | #define restrict __restrict | #define HAVE_MPI 1 | #define SWIFT_MPI_LIBRARY "Open MPI" | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SWIFT_MEMUSE_STATM 1 | #define HAVE_POSIX_MEMALIGN 1 | #define HAVE_LIBM 1 | #define HAVE_LIBGSLCBLAS 1 | #define HAVE_LIBGSL 1 | #define HAVE_LIBGMP 1 | #define HAVE_PTHREAD_PRIO_INHERIT 1 | #define HAVE_PTHREAD_BARRIERS 1 | #define HAVE_POSIX_FALLOCATE 1 | #define HAVE_FFTW 1 | #define HAVE_THREADED_FFTW 1 | #define SWIFT_RANDOM_SEED_XOR 0 | #define HAVE_HDF5 1 | #define HAVE_LUSTREAPI 1 | #define HAVE_FE_ENABLE_EXCEPT 1 | #define HAVE_SETAFFINITY 1 | #define HAVE_LIBNUMA 1 | #define HAVE_IMMINTRIN_H 1 | #define HAVE_SYS_TIME_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_SYS_TIME_H 1 | /* end confdefs.h. */ | #ifdef HAVE_INTRINSICS_H | # include | #endif | | | #include configure:28416: result: no configure:28432: checking for mach/mach_time.h configure:28432: mpicc -c -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 conftest.c:59:10: fatal error: mach/mach_time.h: No such file or directory 59 | #include | ^~~~~~~~~~~~~~~~~~ compilation terminated. configure:28432: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "SWIFT" | #define PACKAGE_TARNAME "swift" | #define PACKAGE_VERSION "2025.04" | #define PACKAGE_STRING "SWIFT 2025.04" | #define PACKAGE_BUGREPORT "https://gitlab.cosma.dur.ac.uk/swift/swiftsim" | #define PACKAGE_URL "" | #define PACKAGE "swift" | #define VERSION "2025.04" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define HAVE_OPENMP 1 | #define _GLIBCXX_INCLUDE_NEXT_C_HEADERS 1 | #define restrict __restrict | #define HAVE_MPI 1 | #define SWIFT_MPI_LIBRARY "Open MPI" | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SWIFT_MEMUSE_STATM 1 | #define HAVE_POSIX_MEMALIGN 1 | #define HAVE_LIBM 1 | #define HAVE_LIBGSLCBLAS 1 | #define HAVE_LIBGSL 1 | #define HAVE_LIBGMP 1 | #define HAVE_PTHREAD_PRIO_INHERIT 1 | #define HAVE_PTHREAD_BARRIERS 1 | #define HAVE_POSIX_FALLOCATE 1 | #define HAVE_FFTW 1 | #define HAVE_THREADED_FFTW 1 | #define SWIFT_RANDOM_SEED_XOR 0 | #define HAVE_HDF5 1 | #define HAVE_LUSTREAPI 1 | #define HAVE_FE_ENABLE_EXCEPT 1 | #define HAVE_SETAFFINITY 1 | #define HAVE_LIBNUMA 1 | #define HAVE_IMMINTRIN_H 1 | #define HAVE_SYS_TIME_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_SYS_TIME_H 1 | /* end confdefs.h. */ | #ifdef HAVE_MACH_MACH_TIME_H | # include | #endif | | | #include configure:28432: result: no configure:28447: checking for hrtime_t configure:28447: mpicc -c -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 conftest.c: In function 'main': conftest.c:61:13: error: 'hrtime_t' undeclared (first use in this function); did you mean 'time_t'? 61 | if (sizeof (hrtime_t)) | ^~~~~~~~ | time_t conftest.c:61:13: note: each undeclared identifier is reported only once for each function it appears in configure:28447: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "SWIFT" | #define PACKAGE_TARNAME "swift" | #define PACKAGE_VERSION "2025.04" | #define PACKAGE_STRING "SWIFT 2025.04" | #define PACKAGE_BUGREPORT "https://gitlab.cosma.dur.ac.uk/swift/swiftsim" | #define PACKAGE_URL "" | #define PACKAGE "swift" | #define VERSION "2025.04" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define HAVE_OPENMP 1 | #define _GLIBCXX_INCLUDE_NEXT_C_HEADERS 1 | #define restrict __restrict | #define HAVE_MPI 1 | #define SWIFT_MPI_LIBRARY "Open MPI" | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SWIFT_MEMUSE_STATM 1 | #define HAVE_POSIX_MEMALIGN 1 | #define HAVE_LIBM 1 | #define HAVE_LIBGSLCBLAS 1 | #define HAVE_LIBGSL 1 | #define HAVE_LIBGMP 1 | #define HAVE_PTHREAD_PRIO_INHERIT 1 | #define HAVE_PTHREAD_BARRIERS 1 | #define HAVE_POSIX_FALLOCATE 1 | #define HAVE_FFTW 1 | #define HAVE_THREADED_FFTW 1 | #define SWIFT_RANDOM_SEED_XOR 0 | #define HAVE_HDF5 1 | #define HAVE_LUSTREAPI 1 | #define HAVE_FE_ENABLE_EXCEPT 1 | #define HAVE_SETAFFINITY 1 | #define HAVE_LIBNUMA 1 | #define HAVE_IMMINTRIN_H 1 | #define HAVE_SYS_TIME_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_SYS_TIME_H 1 | /* end confdefs.h. */ | #if HAVE_SYS_TIME_H | #include | #endif | | int | main () | { | if (sizeof (hrtime_t)) | return 0; | ; | return 0; | } configure:28447: result: no configure:28460: checking for gethrtime configure:28460: mpicc -o conftest -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ -lpthread -lpthread -lm conftest.c -lpthread -lm >&5 /usr/bin/ld: /tmp/cckpKH4Y.o: in function `main': conftest.c:(.text+0xa): undefined reference to `gethrtime' collect2: error: ld returned 1 exit status configure:28460: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "SWIFT" | #define PACKAGE_TARNAME "swift" | #define PACKAGE_VERSION "2025.04" | #define PACKAGE_STRING "SWIFT 2025.04" | #define PACKAGE_BUGREPORT "https://gitlab.cosma.dur.ac.uk/swift/swiftsim" | #define PACKAGE_URL "" | #define PACKAGE "swift" | #define VERSION "2025.04" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define HAVE_OPENMP 1 | #define _GLIBCXX_INCLUDE_NEXT_C_HEADERS 1 | #define restrict __restrict | #define HAVE_MPI 1 | #define SWIFT_MPI_LIBRARY "Open MPI" | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SWIFT_MEMUSE_STATM 1 | #define HAVE_POSIX_MEMALIGN 1 | #define HAVE_LIBM 1 | #define HAVE_LIBGSLCBLAS 1 | #define HAVE_LIBGSL 1 | #define HAVE_LIBGMP 1 | #define HAVE_PTHREAD_PRIO_INHERIT 1 | #define HAVE_PTHREAD_BARRIERS 1 | #define HAVE_POSIX_FALLOCATE 1 | #define HAVE_FFTW 1 | #define HAVE_THREADED_FFTW 1 | #define SWIFT_RANDOM_SEED_XOR 0 | #define HAVE_HDF5 1 | #define HAVE_LUSTREAPI 1 | #define HAVE_FE_ENABLE_EXCEPT 1 | #define HAVE_SETAFFINITY 1 | #define HAVE_LIBNUMA 1 | #define HAVE_IMMINTRIN_H 1 | #define HAVE_SYS_TIME_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_SYS_TIME_H 1 | /* end confdefs.h. */ | /* Define gethrtime to an innocuous variant, in case declares gethrtime. | For example, HP-UX 11i declares gettimeofday. */ | #define gethrtime innocuous_gethrtime | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char gethrtime (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef gethrtime | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char gethrtime (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_gethrtime || defined __stub___gethrtime | choke me | #endif | | int | main () | { | return gethrtime (); | ; | return 0; | } configure:28460: result: no configure:28460: checking for read_real_time configure:28460: mpicc -o conftest -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ -lpthread -lpthread -lm conftest.c -lpthread -lm >&5 /usr/bin/ld: /tmp/cchiNfAx.o: in function `main': conftest.c:(.text+0xa): undefined reference to `read_real_time' collect2: error: ld returned 1 exit status configure:28460: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "SWIFT" | #define PACKAGE_TARNAME "swift" | #define PACKAGE_VERSION "2025.04" | #define PACKAGE_STRING "SWIFT 2025.04" | #define PACKAGE_BUGREPORT "https://gitlab.cosma.dur.ac.uk/swift/swiftsim" | #define PACKAGE_URL "" | #define PACKAGE "swift" | #define VERSION "2025.04" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define HAVE_OPENMP 1 | #define _GLIBCXX_INCLUDE_NEXT_C_HEADERS 1 | #define restrict __restrict | #define HAVE_MPI 1 | #define SWIFT_MPI_LIBRARY "Open MPI" | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SWIFT_MEMUSE_STATM 1 | #define HAVE_POSIX_MEMALIGN 1 | #define HAVE_LIBM 1 | #define HAVE_LIBGSLCBLAS 1 | #define HAVE_LIBGSL 1 | #define HAVE_LIBGMP 1 | #define HAVE_PTHREAD_PRIO_INHERIT 1 | #define HAVE_PTHREAD_BARRIERS 1 | #define HAVE_POSIX_FALLOCATE 1 | #define HAVE_FFTW 1 | #define HAVE_THREADED_FFTW 1 | #define SWIFT_RANDOM_SEED_XOR 0 | #define HAVE_HDF5 1 | #define HAVE_LUSTREAPI 1 | #define HAVE_FE_ENABLE_EXCEPT 1 | #define HAVE_SETAFFINITY 1 | #define HAVE_LIBNUMA 1 | #define HAVE_IMMINTRIN_H 1 | #define HAVE_SYS_TIME_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_SYS_TIME_H 1 | /* end confdefs.h. */ | /* Define read_real_time to an innocuous variant, in case declares read_real_time. | For example, HP-UX 11i declares gettimeofday. */ | #define read_real_time innocuous_read_real_time | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char read_real_time (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef read_real_time | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char read_real_time (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_read_real_time || defined __stub___read_real_time | choke me | #endif | | int | main () | { | return read_real_time (); | ; | return 0; | } configure:28460: result: no configure:28460: checking for time_base_to_time configure:28460: mpicc -o conftest -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ -lpthread -lpthread -lm conftest.c -lpthread -lm >&5 /usr/bin/ld: /tmp/ccmACZoE.o: in function `main': conftest.c:(.text+0xa): undefined reference to `time_base_to_time' collect2: error: ld returned 1 exit status configure:28460: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "SWIFT" | #define PACKAGE_TARNAME "swift" | #define PACKAGE_VERSION "2025.04" | #define PACKAGE_STRING "SWIFT 2025.04" | #define PACKAGE_BUGREPORT "https://gitlab.cosma.dur.ac.uk/swift/swiftsim" | #define PACKAGE_URL "" | #define PACKAGE "swift" | #define VERSION "2025.04" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define HAVE_OPENMP 1 | #define _GLIBCXX_INCLUDE_NEXT_C_HEADERS 1 | #define restrict __restrict | #define HAVE_MPI 1 | #define SWIFT_MPI_LIBRARY "Open MPI" | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SWIFT_MEMUSE_STATM 1 | #define HAVE_POSIX_MEMALIGN 1 | #define HAVE_LIBM 1 | #define HAVE_LIBGSLCBLAS 1 | #define HAVE_LIBGSL 1 | #define HAVE_LIBGMP 1 | #define HAVE_PTHREAD_PRIO_INHERIT 1 | #define HAVE_PTHREAD_BARRIERS 1 | #define HAVE_POSIX_FALLOCATE 1 | #define HAVE_FFTW 1 | #define HAVE_THREADED_FFTW 1 | #define SWIFT_RANDOM_SEED_XOR 0 | #define HAVE_HDF5 1 | #define HAVE_LUSTREAPI 1 | #define HAVE_FE_ENABLE_EXCEPT 1 | #define HAVE_SETAFFINITY 1 | #define HAVE_LIBNUMA 1 | #define HAVE_IMMINTRIN_H 1 | #define HAVE_SYS_TIME_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_SYS_TIME_H 1 | /* end confdefs.h. */ | /* Define time_base_to_time to an innocuous variant, in case declares time_base_to_time. | For example, HP-UX 11i declares gettimeofday. */ | #define time_base_to_time innocuous_time_base_to_time | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char time_base_to_time (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef time_base_to_time | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char time_base_to_time (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_time_base_to_time || defined __stub___time_base_to_time | choke me | #endif | | int | main () | { | return time_base_to_time (); | ; | return 0; | } configure:28460: result: no configure:28460: checking for clock_gettime configure:28460: mpicc -o conftest -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ -lpthread -lpthread -lm conftest.c -lpthread -lm >&5 configure:28460: $? = 0 configure:28460: result: yes configure:28460: checking for mach_absolute_time configure:28460: mpicc -o conftest -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ -lpthread -lpthread -lm conftest.c -lpthread -lm >&5 /usr/bin/ld: /tmp/ccqwtUsy.o: in function `main': conftest.c:(.text+0xa): undefined reference to `mach_absolute_time' collect2: error: ld returned 1 exit status configure:28460: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "SWIFT" | #define PACKAGE_TARNAME "swift" | #define PACKAGE_VERSION "2025.04" | #define PACKAGE_STRING "SWIFT 2025.04" | #define PACKAGE_BUGREPORT "https://gitlab.cosma.dur.ac.uk/swift/swiftsim" | #define PACKAGE_URL "" | #define PACKAGE "swift" | #define VERSION "2025.04" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define HAVE_OPENMP 1 | #define _GLIBCXX_INCLUDE_NEXT_C_HEADERS 1 | #define restrict __restrict | #define HAVE_MPI 1 | #define SWIFT_MPI_LIBRARY "Open MPI" | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SWIFT_MEMUSE_STATM 1 | #define HAVE_POSIX_MEMALIGN 1 | #define HAVE_LIBM 1 | #define HAVE_LIBGSLCBLAS 1 | #define HAVE_LIBGSL 1 | #define HAVE_LIBGMP 1 | #define HAVE_PTHREAD_PRIO_INHERIT 1 | #define HAVE_PTHREAD_BARRIERS 1 | #define HAVE_POSIX_FALLOCATE 1 | #define HAVE_FFTW 1 | #define HAVE_THREADED_FFTW 1 | #define SWIFT_RANDOM_SEED_XOR 0 | #define HAVE_HDF5 1 | #define HAVE_LUSTREAPI 1 | #define HAVE_FE_ENABLE_EXCEPT 1 | #define HAVE_SETAFFINITY 1 | #define HAVE_LIBNUMA 1 | #define HAVE_IMMINTRIN_H 1 | #define HAVE_SYS_TIME_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_CLOCK_GETTIME 1 | /* end confdefs.h. */ | /* Define mach_absolute_time to an innocuous variant, in case declares mach_absolute_time. | For example, HP-UX 11i declares gettimeofday. */ | #define mach_absolute_time innocuous_mach_absolute_time | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char mach_absolute_time (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef mach_absolute_time | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char mach_absolute_time (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_mach_absolute_time || defined __stub___mach_absolute_time | choke me | #endif | | int | main () | { | return mach_absolute_time (); | ; | return 0; | } configure:28460: result: no configure:28469: checking for _rtc intrinsic configure:28485: mpicc -o conftest -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ -lpthread -lpthread -lm conftest.c -lpthread -lm >&5 conftest.c: In function 'main': conftest.c:61:1: error: implicit declaration of function '_rtc' [-Wimplicit-function-declaration] 61 | _rtc() | ^~~~ configure:28485: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "SWIFT" | #define PACKAGE_TARNAME "swift" | #define PACKAGE_VERSION "2025.04" | #define PACKAGE_STRING "SWIFT 2025.04" | #define PACKAGE_BUGREPORT "https://gitlab.cosma.dur.ac.uk/swift/swiftsim" | #define PACKAGE_URL "" | #define PACKAGE "swift" | #define VERSION "2025.04" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define HAVE_OPENMP 1 | #define _GLIBCXX_INCLUDE_NEXT_C_HEADERS 1 | #define restrict __restrict | #define HAVE_MPI 1 | #define SWIFT_MPI_LIBRARY "Open MPI" | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SWIFT_MEMUSE_STATM 1 | #define HAVE_POSIX_MEMALIGN 1 | #define HAVE_LIBM 1 | #define HAVE_LIBGSLCBLAS 1 | #define HAVE_LIBGSL 1 | #define HAVE_LIBGMP 1 | #define HAVE_PTHREAD_PRIO_INHERIT 1 | #define HAVE_PTHREAD_BARRIERS 1 | #define HAVE_POSIX_FALLOCATE 1 | #define HAVE_FFTW 1 | #define HAVE_THREADED_FFTW 1 | #define SWIFT_RANDOM_SEED_XOR 0 | #define HAVE_HDF5 1 | #define HAVE_LUSTREAPI 1 | #define HAVE_FE_ENABLE_EXCEPT 1 | #define HAVE_SETAFFINITY 1 | #define HAVE_LIBNUMA 1 | #define HAVE_IMMINTRIN_H 1 | #define HAVE_SYS_TIME_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_CLOCK_GETTIME 1 | /* end confdefs.h. */ | #ifdef HAVE_INTRINSICS_H | #include | #endif | int | main () | { | _rtc() | ; | return 0; | } configure:28494: result: no configure:28523: checking for exp10 in -lm configure:28548: mpicc -o conftest -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ -lpthread -lpthread -lm conftest.c -lm -lpthread -lm >&5 conftest.c:62:6: warning: conflicting types for built-in function 'exp10'; expected 'double(double)' [-Wbuiltin-declaration-mismatch] 62 | char exp10 (); | ^~~~~ configure:28548: $? = 0 configure:28557: result: yes configure:28565: checking for exp10f in -lm configure:28590: mpicc -o conftest -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ -lpthread -lpthread -lm conftest.c -lm -lpthread -lm >&5 conftest.c:63:6: warning: conflicting types for built-in function 'exp10f'; expected 'float(float)' [-Wbuiltin-declaration-mismatch] 63 | char exp10f (); | ^~~~~~ configure:28590: $? = 0 configure:28599: result: yes configure:28607: checking for __exp10 in -lm configure:28632: mpicc -o conftest -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ -lpthread -lpthread -lm conftest.c -lm -lpthread -lm >&5 /usr/bin/ld: /tmp/ccuVy91E.o: in function `main': conftest.c:(.text+0xa): undefined reference to `__exp10' collect2: error: ld returned 1 exit status configure:28632: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "SWIFT" | #define PACKAGE_TARNAME "swift" | #define PACKAGE_VERSION "2025.04" | #define PACKAGE_STRING "SWIFT 2025.04" | #define PACKAGE_BUGREPORT "https://gitlab.cosma.dur.ac.uk/swift/swiftsim" | #define PACKAGE_URL "" | #define PACKAGE "swift" | #define VERSION "2025.04" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define HAVE_OPENMP 1 | #define _GLIBCXX_INCLUDE_NEXT_C_HEADERS 1 | #define restrict __restrict | #define HAVE_MPI 1 | #define SWIFT_MPI_LIBRARY "Open MPI" | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SWIFT_MEMUSE_STATM 1 | #define HAVE_POSIX_MEMALIGN 1 | #define HAVE_LIBM 1 | #define HAVE_LIBGSLCBLAS 1 | #define HAVE_LIBGSL 1 | #define HAVE_LIBGMP 1 | #define HAVE_PTHREAD_PRIO_INHERIT 1 | #define HAVE_PTHREAD_BARRIERS 1 | #define HAVE_POSIX_FALLOCATE 1 | #define HAVE_FFTW 1 | #define HAVE_THREADED_FFTW 1 | #define SWIFT_RANDOM_SEED_XOR 0 | #define HAVE_HDF5 1 | #define HAVE_LUSTREAPI 1 | #define HAVE_FE_ENABLE_EXCEPT 1 | #define HAVE_SETAFFINITY 1 | #define HAVE_LIBNUMA 1 | #define HAVE_IMMINTRIN_H 1 | #define HAVE_SYS_TIME_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_CLOCK_GETTIME 1 | #define HAVE_EXP10 1 | #define HAVE_EXP10F 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char __exp10 (); | int | main () | { | return __exp10 (); | ; | return 0; | } configure:28641: result: no configure:28649: checking for __exp10f in -lm configure:28674: mpicc -o conftest -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ -lpthread -lpthread -lm conftest.c -lm -lpthread -lm >&5 /usr/bin/ld: /tmp/ccxQ9m9c.o: in function `main': conftest.c:(.text+0xa): undefined reference to `__exp10f' collect2: error: ld returned 1 exit status configure:28674: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "SWIFT" | #define PACKAGE_TARNAME "swift" | #define PACKAGE_VERSION "2025.04" | #define PACKAGE_STRING "SWIFT 2025.04" | #define PACKAGE_BUGREPORT "https://gitlab.cosma.dur.ac.uk/swift/swiftsim" | #define PACKAGE_URL "" | #define PACKAGE "swift" | #define VERSION "2025.04" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define HAVE_OPENMP 1 | #define _GLIBCXX_INCLUDE_NEXT_C_HEADERS 1 | #define restrict __restrict | #define HAVE_MPI 1 | #define SWIFT_MPI_LIBRARY "Open MPI" | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SWIFT_MEMUSE_STATM 1 | #define HAVE_POSIX_MEMALIGN 1 | #define HAVE_LIBM 1 | #define HAVE_LIBGSLCBLAS 1 | #define HAVE_LIBGSL 1 | #define HAVE_LIBGMP 1 | #define HAVE_PTHREAD_PRIO_INHERIT 1 | #define HAVE_PTHREAD_BARRIERS 1 | #define HAVE_POSIX_FALLOCATE 1 | #define HAVE_FFTW 1 | #define HAVE_THREADED_FFTW 1 | #define SWIFT_RANDOM_SEED_XOR 0 | #define HAVE_HDF5 1 | #define HAVE_LUSTREAPI 1 | #define HAVE_FE_ENABLE_EXCEPT 1 | #define HAVE_SETAFFINITY 1 | #define HAVE_LIBNUMA 1 | #define HAVE_IMMINTRIN_H 1 | #define HAVE_SYS_TIME_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_CLOCK_GETTIME 1 | #define HAVE_EXP10 1 | #define HAVE_EXP10F 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char __exp10f (); | int | main () | { | return __exp10f (); | ; | return 0; | } configure:28683: result: no configure:28695: checking for sincos in -lm configure:28720: mpicc -o conftest -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ -lpthread -lpthread -lm conftest.c -lm -lpthread -lm >&5 conftest.c:64:6: warning: conflicting types for built-in function 'sincos'; expected 'void(double, double *, double *)' [-Wbuiltin-declaration-mismatch] 64 | char sincos (); | ^~~~~~ conftest.c:1:1: note: 'sincos' is declared in header '' 1 | /* confdefs.h */ configure:28720: $? = 0 configure:28729: result: yes configure:28737: checking for sincosf in -lm configure:28762: mpicc -o conftest -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ -lpthread -lpthread -lm conftest.c -lm -lpthread -lm >&5 conftest.c:65:6: warning: conflicting types for built-in function 'sincosf'; expected 'void(float, float *, float *)' [-Wbuiltin-declaration-mismatch] 65 | char sincosf (); | ^~~~~~~ conftest.c:1:1: note: 'sincosf' is declared in header '' 1 | /* confdefs.h */ configure:28762: $? = 0 configure:28771: result: yes configure:28869: checking math.h usability configure:28869: mpicc -c -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 configure:28869: $? = 0 configure:28869: result: yes configure:28869: checking math.h presence configure:28869: /cosma/local/gcc/14.1.0/bin/gcc -E -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c configure:28869: $? = 0 configure:28869: result: yes configure:28869: checking for math.h configure:28869: result: yes configure:28875: checking whether __sincos is declared configure:28875: mpicc -c -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 configure:28875: $? = 0 configure:28875: result: yes configure:28896: checking whether __sincosf is declared configure:28896: mpicc -c -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 configure:28896: $? = 0 configure:28896: result: yes configure:29026: checking for backtrace configure:29026: mpicc -o conftest -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ -lpthread -lpthread -lm conftest.c -lpthread -lm >&5 configure:29026: $? = 0 configure:29026: result: yes configure:29026: checking for backtrace_symbols configure:29026: mpicc -o conftest -pthread -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include -L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ -lpthread -lpthread -lm conftest.c -lpthread -lm >&5 configure:29026: $? = 0 configure:29026: result: yes configure:29142: checking whether C compiler accepts -Wstrict-prototypes configure:29154: mpicc -c -pthread -Wall -Wextra -Wno-unused-parameter -Wshadow -Werror -Wno-alloc-size-larger-than -pthread -Wall -Wextra -Wno-unused-parameter -Wshadow -Werror -Wno-alloc-size-larger-than -Wstrict-prototypes -I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include conftest.c >&5 configure:29154: $? = 0 configure:29163: result: yes configure:30852: checking for git configure:30870: found /usr/bin/git configure:30882: result: /usr/bin/git configure:33259: checking that generated files are newer than configure configure:33265: result: done configure:33472: creating ./config.status ## ---------------------- ## ## Running config.status. ## ## ---------------------- ## This file was extended by SWIFT config.status 2025.04, which was generated by GNU Autoconf 2.69. Invocation command line was CONFIG_FILES = CONFIG_HEADERS = CONFIG_LINKS = CONFIG_COMMANDS = $ ./config.status on ga003.pri.cosma.local config.status:1438: creating Makefile config.status:1438: creating src/Makefile config.status:1438: creating examples/Makefile config.status:1438: creating examples/Cooling/CoolingRates/Makefile config.status:1438: creating doc/Makefile config.status:1438: creating doc/Doxyfile config.status:1438: creating tests/Makefile config.status:1438: creating argparse/Makefile config.status:1438: creating tools/Makefile config.status:1438: creating tests/testReading.sh config.status:1438: creating tests/testActivePair.sh config.status:1438: creating tests/test27cells.sh config.status:1438: creating tests/test27cellsPerturbed.sh config.status:1438: creating tests/test27cellsStars.sh config.status:1438: creating tests/test27cellsStarsPerturbed.sh config.status:1438: creating tests/test125cells.sh config.status:1438: creating tests/test125cellsPerturbed.sh config.status:1438: creating tests/testPeriodicBC.sh config.status:1438: creating tests/testPeriodicBCPerturbed.sh config.status:1438: creating tests/testInteractions.sh config.status:1438: creating tests/testParser.sh config.status:1438: creating tests/testSelectOutput.sh config.status:1438: creating tests/testFormat.sh config.status:1438: creating tests/testNeutrinoCosmology.sh config.status:1438: creating tests/output_list_params.yml config.status:1438: creating config.h config.status:1667: executing depfiles commands config.status:1744: cd . && sed -e '/# am--include-marker/d' Makefile | make -f - am--depfiles config.status:1749: $? = 0 config.status:1744: cd src && sed -e '/# am--include-marker/d' Makefile | make -f - am--depfiles config.status:1749: $? = 0 config.status:1744: cd examples/Cooling/CoolingRates && sed -e '/# am--include-marker/d' Makefile | make -f - am--depfiles config.status:1749: $? = 0 config.status:1744: cd tests && sed -e '/# am--include-marker/d' Makefile | make -f - am--depfiles config.status:1749: $? = 0 config.status:1744: cd argparse && sed -e '/# am--include-marker/d' Makefile | make -f - am--depfiles config.status:1749: $? = 0 config.status:1667: executing libtool commands configure:36151: result: ------- Summary -------- SWIFT v.2025.04 Compiler : mpicc - vendor : gnu - version : 14.1.0 - flags : -pthread -Wall -Wextra -Wno-unused-parameter -Wshadow -Werror -Wno-alloc-size-larger-than -Wstrict-prototypes MPI enabled : yes HDF5 enabled : yes - parallel : no LUSTRE API enabled : yes METIS/ParMETIS : no / no FFTW3 enabled : yes - threaded/openmp : yes / no - MPI : no - ARM : no GSL enabled : yes GMP enabled : yes HEALPix C enabled : no libNUMA enabled : yes GRACKLE enabled : no Sundials enabled : no Special allocators : no CPU profiler : no Pthread barriers : yes VELOCIraptor enabled : no FoF activated: : no Lightcones enabled : no Moving-mesh enabled : no Hydro scheme : sphenix Dimensionality : 3 Kernel function : cubic-spline Equation of state : ideal-gas Adiabatic index : 5/3 Riemann solver : none SPMHD scheme : none Adaptive softening : no Gravity scheme : with-multi-softening Multipole order : 4 Compute potential : yes No gravity below ID : no Make gravity glass : no External potential : none Forcing terms : none Pressure floor : none Entropy floor : none Cooling function : none Chemistry : none Tracers : none Stellar model : basic Star formation model : none Star feedback model : none Sink particle model : none Black holes model : none Radiative transfer : none Self-interacting dark matter model : none Extra i/o : none Atomic operations in tasks : yes Individual timers : no Task debugging : no Threadpool debugging : no Debugging checks : no Interaction debugging : no Stars interaction debugging : no Naive interactions : no Naive stars interactions : no Gravity checks : no Custom icbrtf : no Boundary particles : no Fixed boundary particles : no Planetary fixed entropy : no Ghost statistics : no Continuous Sim. Data Stream : no ------------------------ ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=x86_64-pc-linux-gnu ac_cv_c_compiler_gnu=yes ac_cv_c_inline=inline ac_cv_c_restrict=__restrict ac_cv_env_CC_set=set ac_cv_env_CC_value=/cosma/local/gcc/14.1.0/bin/gcc ac_cv_env_CFITSIO_CFLAGS_set= ac_cv_env_CFITSIO_CFLAGS_value= ac_cv_env_CFITSIO_LIBS_set= ac_cv_env_CFITSIO_LIBS_value= ac_cv_env_CFLAGS_set= ac_cv_env_CFLAGS_value= ac_cv_env_CHEALPIX_CFLAGS_set= ac_cv_env_CHEALPIX_CFLAGS_value= ac_cv_env_CHEALPIX_LIBS_set= ac_cv_env_CHEALPIX_LIBS_value= ac_cv_env_CPPFLAGS_set=set ac_cv_env_CPPFLAGS_value='-I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include' ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_DOXYGEN_PAPER_SIZE_set= ac_cv_env_DOXYGEN_PAPER_SIZE_value= ac_cv_env_FCFLAGS_set= ac_cv_env_FCFLAGS_value= ac_cv_env_FC_set=set ac_cv_env_FC_value=/cosma/local/gcc/14.1.0/bin/gfortran ac_cv_env_GRAVITY_CFLAGS_set= ac_cv_env_GRAVITY_CFLAGS_value= ac_cv_env_LDFLAGS_set=set ac_cv_env_LDFLAGS_value='-L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/' ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_LT_SYS_LIBRARY_PATH_set= ac_cv_env_LT_SYS_LIBRARY_PATH_value= ac_cv_env_MPICC_set= ac_cv_env_MPICC_value= ac_cv_env_MPIRUN_set= ac_cv_env_MPIRUN_value= ac_cv_env_PKG_CONFIG_LIBDIR_set= ac_cv_env_PKG_CONFIG_LIBDIR_value= ac_cv_env_PKG_CONFIG_PATH_set=set ac_cv_env_PKG_CONFIG_PATH_value=/cosma/local/Python/3.12.4/lib/pkgconfig:/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib/pkgconfig:/cosma/local/gsl/2.8/lib/pkgconfig:/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib/pkgconfig ac_cv_env_PKG_CONFIG_set= ac_cv_env_PKG_CONFIG_value= ac_cv_env_build_alias_set= ac_cv_env_build_alias_value= ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_func_MPI_Init=yes ac_cv_func_backtrace=yes ac_cv_func_backtrace_symbols=yes ac_cv_func_clock_gettime=yes ac_cv_func_feenableexcept=yes ac_cv_func_gethrtime=no ac_cv_func_mach_absolute_time=no ac_cv_func_pthread_setaffinity_np=yes ac_cv_func_read_real_time=no ac_cv_func_time_base_to_time=no ac_cv_hadf5_h=yes ac_cv_have_decl___sincos=yes ac_cv_have_decl___sincosf=yes ac_cv_header_altivec_h=no ac_cv_header_c_asm_h=no ac_cv_header_dlfcn_h=yes ac_cv_header_hdf5_h=yes ac_cv_header_immintrin_h=yes ac_cv_header_intrinsics_h=no ac_cv_header_inttypes_h=yes ac_cv_header_mach_mach_time_h=no ac_cv_header_math_h=yes ac_cv_header_memory_h=yes ac_cv_header_minix_config_h=no ac_cv_header_numa_h=yes ac_cv_header_stdc=yes ac_cv_header_stdint_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_sys_stat_h=yes ac_cv_header_sys_time_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_unistd_h=yes ac_cv_host=x86_64-pc-linux-gnu ac_cv_lib_fftw3_fftw_init_threads=yes ac_cv_lib_fftw3_fftw_malloc=yes ac_cv_lib_gmp___gmpz_inits=yes ac_cv_lib_gsl_gsl_integration_qag=yes ac_cv_lib_gslcblas_cblas_dgemm=yes ac_cv_lib_hdf5_H5Fcreate=yes ac_cv_lib_hdf5_hl_main=yes ac_cv_lib_lustreapi_llapi_obd_statfs=yes ac_cv_lib_m___exp10=no ac_cv_lib_m___exp10f=no ac_cv_lib_m_exp10=yes ac_cv_lib_m_exp10f=yes ac_cv_lib_m_sincos=yes ac_cv_lib_m_sincosf=yes ac_cv_lib_m_sqrt=yes ac_cv_lib_numa_numa_available=yes ac_cv_lib_pthread_posix_fallocate=yes ac_cv_lib_pthread_pthread_barrier_init=yes ac_cv_libhdf5=yes ac_cv_objext=o ac_cv_path_EGREP='/usr/bin/grep -E' ac_cv_path_FGREP='/usr/bin/grep -F' ac_cv_path_GIT_CMD=/usr/bin/git ac_cv_path_GREP=/usr/bin/grep ac_cv_path_H5CC=/cosma/local/hdf5//gnu_14.1.0/1.14.4/bin/h5cc ac_cv_path_MPIRUN=/cosma/local/openmpi/gnu_14.1.0/5.0.3/bin/mpirun ac_cv_path_SED=/usr/bin/sed ac_cv_path_install='/usr/bin/install -c' ac_cv_path_lt_DD=/usr/bin/dd ac_cv_path_mkdir=/usr/bin/mkdir ac_cv_prog_AWK=gawk ac_cv_prog_CPP='/cosma/local/gcc/14.1.0/bin/gcc -E' ac_cv_prog_MPICC=mpicc ac_cv_prog_ac_ct_AR=ar ac_cv_prog_ac_ct_CC=/cosma/local/gcc/14.1.0/bin/gcc ac_cv_prog_ac_ct_OBJDUMP=objdump ac_cv_prog_ac_ct_RANLIB=ranlib ac_cv_prog_ac_ct_STRIP=strip ac_cv_prog_cc_c89= ac_cv_prog_cc_c99= ac_cv_prog_cc_g=yes ac_cv_prog_make_make_set=yes ac_cv_safe_to_define___extensions__=yes ac_cv_type_hrtime_t=no am_cv_CC_dependencies_compiler_type=gcc3 am_cv_make_support_nested_variables=yes am_cv_prog_cc_c_o=yes ax_cv_PTHREAD_CLANG=no ax_cv_PTHREAD_JOINABLE_ATTR=PTHREAD_CREATE_JOINABLE ax_cv_PTHREAD_PRIO_INHERIT=yes ax_cv_PTHREAD_SPECIAL_FLAGS=no ax_cv_asm_arm_cntvct_works=no ax_cv_asm_arm_pmccntr_works=no ax_cv_c_compiler_vendor=gnu ax_cv_c_compiler_version=14.1.0 ax_cv_c_openmp=-fopenmp ax_cv_check_cflags__Wstrict_prototypes=yes ax_cv_func_posix_memalign_works=yes lt_cv_ar_at_file=@ lt_cv_deplibs_check_method=pass_all lt_cv_file_magic_cmd='$MAGIC_CMD' lt_cv_file_magic_test_file= lt_cv_ld_reload_flag=-r lt_cv_nm_interface='BSD nm' lt_cv_objdir=.libs lt_cv_path_LD=/usr/bin/ld lt_cv_path_NM='/usr/bin/nm -B' lt_cv_path_mainfest_tool=no lt_cv_prog_compiler_c_o=yes lt_cv_prog_compiler_pic='-fPIC -DPIC' lt_cv_prog_compiler_pic_works=yes lt_cv_prog_compiler_rtti_exceptions=no lt_cv_prog_compiler_static_works=no lt_cv_prog_gnu_ld=yes lt_cv_sharedlib_from_linklib_cmd='printf %s\n' lt_cv_shlibpath_overrides_runpath=no lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p'\'' | sed '\''/ __gnu_lto/d'\''' lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/ {"\1", (void *) \&\1},/p'\''' lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(lib.*\)$/ {"\1", (void *) \&\1},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/ {"lib\1", (void *) \&\1},/p'\''' lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p'\''' lt_cv_sys_global_symbol_to_import= lt_cv_sys_max_cmd_len=4718592 lt_cv_to_host_file_cmd=func_convert_file_noop lt_cv_to_tool_file_cmd=func_convert_file_noop lt_cv_truncate_bin='/usr/bin/dd bs=4096 count=1' ## ----------------- ## ## Output variables. ## ## ----------------- ## ACLOCAL='${SHELL} "/local/jenkins/jobs/SIDM branch/workspace/missing" aclocal-1.16' AMDEPBACKSLASH='\' AMDEP_FALSE='#' AMDEP_TRUE='' AMTAR='$${TAR-tar}' AM_BACKSLASH='\' AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)' AM_DEFAULT_VERBOSITY='1' AM_V='$(V)' AR='ar' AUTOCONF='${SHELL} "/local/jenkins/jobs/SIDM branch/workspace/missing" autoconf' AUTOHEADER='${SHELL} "/local/jenkins/jobs/SIDM branch/workspace/missing" autoheader' AUTOMAKE='${SHELL} "/local/jenkins/jobs/SIDM branch/workspace/missing" automake-1.16' AWK='gawk' CC='mpicc ' CCDEPMODE='depmode=gcc3' CFITSIO_CFLAGS='' CFITSIO_LIBS='' CFLAGS=' -pthread -Wall -Wextra -Wno-unused-parameter -Wshadow -Werror -Wno-alloc-size-larger-than -Wstrict-prototypes' CHEALPIX_CFLAGS='' CHEALPIX_LIBS='' CPP='/cosma/local/gcc/14.1.0/bin/gcc -E' CPPFLAGS='-I/cosma/local/Python/3.12.4/include/python3.12/ -I/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/include -I/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/include -I/cosma/local/hdf5//gnu_14.1.0/1.14.4/include -I/cosma/local/gsl/2.8/include -I/cosma/local/gcc/14.1.0/include' CPUEXT_FLAGS='' CYGPATH_W='echo' DEFS='-DHAVE_CONFIG_H' DEPDIR='.deps' DLLTOOL='false' DOT_PATH='' DOXYGEN_PAPER_SIZE='' DSYMUTIL='' DUMPBIN='' DX_CONFIG='doc/Doxyfile' DX_DOCDIR='doc/' DX_DOT='' DX_DOXYGEN='' DX_DVIPS='' DX_EGREP='' DX_ENV=' SRCDIR='\''.'\'' PROJECT='\''SWIFT'\'' VERSION='\''2025.04'\'' HAVE_DOT='\''NO'\'' GENERATE_MAN='\''NO'\'' GENERATE_RTF='\''NO'\'' GENERATE_XML='\''NO'\'' GENERATE_HTMLHELP='\''NO'\'' GENERATE_CHI='\''NO'\'' GENERATE_HTML='\''NO'\'' GENERATE_LATEX='\''NO'\''' DX_FLAG_chi='0' DX_FLAG_chm='0' DX_FLAG_doc='0' DX_FLAG_dot='0' DX_FLAG_html='0' DX_FLAG_man='0' DX_FLAG_pdf='0' DX_FLAG_ps='0' DX_FLAG_rtf='0' DX_FLAG_xml='0' DX_HHC='' DX_LATEX='' DX_MAKEINDEX='' DX_PDFLATEX='' DX_PERL='' DX_PROJECT='SWIFT' DX_RULES='' ECHO_C='' ECHO_N='-n' ECHO_T='' EGREP='/usr/bin/grep -E' EXEEXT='' FC='/cosma/local/gcc/14.1.0/bin/gfortran' FCFLAGS='' FCLIBS='' FFTW_INCS='' FFTW_LIBS='-lfftw3_threads -lfftw3' FFTW_MPI_INCS='' FFTW_MPI_LIBS='' FGREP='/usr/bin/grep -F' GENERATE_CHI='NO' GENERATE_HTML='NO' GENERATE_HTMLHELP='NO' GENERATE_LATEX='NO' GENERATE_MAN='NO' GENERATE_RTF='NO' GENERATE_XML='NO' GIT_CMD='/usr/bin/git' GMP_LIBS='-lgmp' GRACKLE_INCS='' GRACKLE_LIBS='' GRAVITY_CFLAGS='' GREP='/usr/bin/grep' GSL_INCS='' GSL_LIBS='-lgsl -lgslcblas' H5CC='/cosma/local/hdf5//gnu_14.1.0/1.14.4/bin/h5cc' H5FC='/cosma/local/hdf5//gnu_14.1.0/1.14.4/bin/h5fc' HAVEAGORAFEEDBACK_FALSE='' HAVEAGORAFEEDBACK_TRUE='#' HAVECSDS_FALSE='' HAVECSDS_TRUE='#' HAVEEAGLECOOLING_FALSE='' HAVEEAGLECOOLING_TRUE='#' HAVEEAGLEEXTRAIO_FALSE='' HAVEEAGLEEXTRAIO_TRUE='#' HAVEEAGLEFLOOR_FALSE='' HAVEEAGLEFLOOR_TRUE='#' HAVEEAGLEKINETICFEEDBACK_FALSE='' HAVEEAGLEKINETICFEEDBACK_TRUE='#' HAVEEAGLETHERMALFEEDBACK_FALSE='' HAVEEAGLETHERMALFEEDBACK_TRUE='#' HAVEFFTW_FALSE='#' HAVEFFTW_TRUE='' HAVEGEARFEEDBACK_FALSE='' HAVEGEARFEEDBACK_TRUE='#' HAVEGEARRT_FALSE='' HAVEGEARRT_TRUE='#' HAVEGMP_FALSE='#' HAVEGMP_TRUE='' HAVEGRACKLECOOLING_FALSE='' HAVEGRACKLECOOLING_TRUE='#' HAVEGRACKLE_FALSE='' HAVEGRACKLE_TRUE='#' HAVEGSL_FALSE='#' HAVEGSL_TRUE='' HAVEJEMALLOC_FALSE='' HAVEJEMALLOC_TRUE='#' HAVELUSTREAPI_FALSE='#' HAVELUSTREAPI_TRUE='' HAVEMETIS_FALSE='' HAVEMETIS_TRUE='#' HAVEMPIFFTW_FALSE='' HAVEMPIFFTW_TRUE='#' HAVEMPI_FALSE='#' HAVEMPI_TRUE='' HAVEPARALLELHDF5_FALSE='' HAVEPARALLELHDF5_TRUE='#' HAVEPARMETIS_FALSE='' HAVEPARMETIS_TRUE='#' HAVEPROFILER_FALSE='' HAVEPROFILER_TRUE='#' HAVEPS2020COOLING_FALSE='' HAVEPS2020COOLING_TRUE='#' HAVEQLACOOLING_FALSE='' HAVEQLACOOLING_TRUE='#' HAVEQLAEAGLECOOLING_FALSE='' HAVEQLAEAGLECOOLING_TRUE='#' HAVESETAFFINITY_FALSE='#' HAVESETAFFINITY_TRUE='' HAVESPHM1RTRT_FALSE='' HAVESPHM1RTRT_TRUE='#' HAVESTANDALONEFOF_FALSE='' HAVESTANDALONEFOF_TRUE='#' HAVETBBMALLOC_FALSE='' HAVETBBMALLOC_TRUE='#' HAVETCMALLOC_FALSE='' HAVETCMALLOC_TRUE='#' HAVEVECTORIZATION_FALSE='#' HAVEVECTORIZATION_TRUE='' HAVEVELOCIRAPTOR_FALSE='' HAVEVELOCIRAPTOR_TRUE='#' HAVE_CHEMISTRY_AGORA_FALSE='' HAVE_CHEMISTRY_AGORA_TRUE='#' HAVE_CHEMISTRY_GEAR_FALSE='' HAVE_CHEMISTRY_GEAR_TRUE='#' HAVE_CHEMISTRY_NONE_FALSE='#' HAVE_CHEMISTRY_NONE_TRUE='' HAVE_DOT='NO' HAVE_DOXYGEN_FALSE='' HAVE_DOXYGEN_TRUE='#' HAVE_GADGET2_FALSE='' HAVE_GADGET2_TRUE='#' HAVE_GRAVITY_MULTISOFTENING_FALSE='#' HAVE_GRAVITY_MULTISOFTENING_TRUE='' HAVE_MOVING_MESH_FALSE='' HAVE_MOVING_MESH_TRUE='#' HAVE_SPHENIX_FALSE='#' HAVE_SPHENIX_TRUE='' HAVE_STARS_BASIC_FALSE='#' HAVE_STARS_BASIC_TRUE='' HAVE_STARS_GEAR_FALSE='' HAVE_STARS_GEAR_TRUE='#' HAVE_STAR_FORMATION_DEFAULT_FALSE='#' HAVE_STAR_FORMATION_DEFAULT_TRUE='' HAVE_STAR_FORMATION_GEAR_FALSE='' HAVE_STAR_FORMATION_GEAR_TRUE='#' HDF5_CC='/cosma/local/gcc/14.1.0/bin/gcc' HDF5_CFLAGS='' HDF5_CPPFLAGS='-I/cosma/local/hdf5/gnu_14.1.0/1.14.4/include -I/cosma/local/gcc/14.1.0/include -I/cosma/local/software/hdf5/build/gnu_14.1.0/1.14.4/src/src/H5FDsubfiling' HDF5_FC='' HDF5_FFLAGS=' -I/cosma/local/hdf5/gnu_14.1.0/1.14.4/include -L/cosma/local/hdf5/gnu_14.1.0/1.14.4/lib -I/cosma/local/hdf5/gnu_14.1.0/1.14.4/lib -L/cosma/local/gcc/14.1.0/lib64/ -I/cosma/local/gcc/14.1.0/lib64/' HDF5_FLIBS=' -lhdf5hl_fortran -lhdf5_hl -lhdf5_fortran -lhdf5 -lz -ldl -lm' HDF5_LDFLAGS=' -L/cosma/local/hdf5/gnu_14.1.0/1.14.4/lib -L/cosma/local/gcc/14.1.0/lib64/' HDF5_LIBS='-lhdf5_hl -lhdf5 -lz -ldl -lm' HDF5_TYPE='serial' HDF5_VERSION='1.14.4-3' HHC_PATH='' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' JEMALLOC_LIBS='' LD='/usr/bin/ld -m elf_x86_64' LDFLAGS='-L/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -Wl,-rpath,/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib -L/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -Wl,-rpath,/cosma/local/parmetis/gnu_14.1.0_ompi_5.0.3/4.0.3/lib -L/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -Wl,-rpath,/cosma/local/hdf5//gnu_14.1.0/1.14.4/lib -L/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/gsl/2.8/lib -Wl,-rpath,/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib -L/cosma/local/gcc/14.1.0/lib64/ -Wl,-rpath,/cosma/local/gcc/14.1.0/lib64/ -lpthread -lpthread -lm ' LIBOBJS='' LIBS='-lpthread -lm ' LIBTOOL='$(SHELL) $(top_builddir)/libtool' LIPO='' LN_S='ln -s' LTLIBOBJS='' LT_SYS_LIBRARY_PATH='' LUSTREAPI_INCS='' LUSTREAPI_LIBS='-llustreapi' MAKEINFO='${SHELL} "/local/jenkins/jobs/SIDM branch/workspace/missing" makeinfo' MANIFEST_TOOL=':' METIS_INCS='' METIS_LIBS='' MKDIR_P='/usr/bin/mkdir -p' MPICC='mpicc' MPILIBS=' ' MPIRUN='/cosma/local/openmpi/gnu_14.1.0/5.0.3/bin/mpirun' MPI_THREAD_LIBS='' NM='/usr/bin/nm -B' NMEDIT='' NUMA_INCS='' NUMA_LIBS='-lnuma' OBJDUMP='objdump' OBJEXT='o' OTOOL64='' OTOOL='' PACKAGE='swift' PACKAGE_BUGREPORT='https://gitlab.cosma.dur.ac.uk/swift/swiftsim' PACKAGE_NAME='SWIFT' PACKAGE_STRING='SWIFT 2025.04' PACKAGE_TARNAME='swift' PACKAGE_URL='' PACKAGE_VERSION='2025.04' PAPER_SIZE='' PARMETIS_INCS='' PARMETIS_LIBS='' PATH_SEPARATOR=':' PERL_PATH='' PKG_CONFIG='' PKG_CONFIG_LIBDIR='' PKG_CONFIG_PATH='/cosma/local/Python/3.12.4/lib/pkgconfig:/cosma/local/fftw//gnu_14.1.0_ompi_5.0.3/3.3.10/lib/pkgconfig:/cosma/local/gsl/2.8/lib/pkgconfig:/cosma/local/openmpi/gnu_14.1.0/5.0.3/lib/pkgconfig' PROFILER_LIBS='' PROJECT='SWIFT' PRTDIAG='' PTHREAD_CC='mpicc ' PTHREAD_CFLAGS='-pthread' PTHREAD_CXX='/cosma/local/gcc/14.1.0/bin/g++' PTHREAD_LIBS='-lpthread' RANLIB='ranlib' SED='/usr/bin/sed' SET_MAKE='' SHELL='/bin/sh' SIMD_FLAGS='' SRCDIR='.' STRIP='strip' SUNDIALS_INCS='' SUNDIALS_LIBS='' TBBMALLOC_LIBS='' TCMALLOC_LIBS='' VELOCIRAPTOR_LIBS='' VELOCIRAPTOR_MPI_LIBS='' VERSION='2025.04' ac_ct_AR='ar' ac_ct_CC='/cosma/local/gcc/14.1.0/bin/gcc' ac_ct_DUMPBIN='' ac_ct_FC='' am__EXEEXT_FALSE='' am__EXEEXT_TRUE='#' am__fastdepCC_FALSE='#' am__fastdepCC_TRUE='' am__include='include' am__isrc='' am__leading_dot='.' am__nodep='_no' am__quote='' am__tar='$${TAR-tar} chof - "$$tardir"' am__untar='$${TAR-tar} xf -' ax_pthread_config='' bindir='${exec_prefix}/bin' build='x86_64-pc-linux-gnu' build_alias='' build_cpu='x86_64' build_os='linux-gnu' build_vendor='pc' datadir='${datarootdir}' datarootdir='${prefix}/share' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' exec_prefix='${prefix}' host='x86_64-pc-linux-gnu' host_alias='' host_cpu='x86_64' host_os='linux-gnu' host_vendor='pc' htmldir='${docdir}' includedir='${prefix}/include' infodir='${datarootdir}/info' install_sh='${SHELL} '\''/local/jenkins/jobs/SIDM branch/workspace/install-sh'\''' libdir='${exec_prefix}/lib' libexecdir='${exec_prefix}/libexec' localedir='${datarootdir}/locale' localstatedir='${prefix}/var' mandir='${datarootdir}/man' mkdir_p='$(MKDIR_P)' oldincludedir='/usr/include' pdfdir='${docdir}' prefix='/usr/local' program_transform_name='s,x,x,' psdir='${docdir}' runstatedir='${localstatedir}/run' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' subdirs='' sysconfdir='${prefix}/etc' target_alias='' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "SWIFT" #define PACKAGE_TARNAME "swift" #define PACKAGE_VERSION "2025.04" #define PACKAGE_STRING "SWIFT 2025.04" #define PACKAGE_BUGREPORT "https://gitlab.cosma.dur.ac.uk/swift/swiftsim" #define PACKAGE_URL "" #define PACKAGE "swift" #define VERSION "2025.04" #define STDC_HEADERS 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_MEMORY_H 1 #define HAVE_STRINGS_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_UNISTD_H 1 #define __EXTENSIONS__ 1 #define _ALL_SOURCE 1 #define _GNU_SOURCE 1 #define _POSIX_PTHREAD_SEMANTICS 1 #define _TANDEM_SOURCE 1 #define HAVE_OPENMP 1 #define _GLIBCXX_INCLUDE_NEXT_C_HEADERS 1 #define restrict __restrict #define HAVE_MPI 1 #define SWIFT_MPI_LIBRARY "Open MPI" #define HAVE_DLFCN_H 1 #define LT_OBJDIR ".libs/" #define SWIFT_MEMUSE_STATM 1 #define HAVE_POSIX_MEMALIGN 1 #define HAVE_LIBM 1 #define HAVE_LIBGSLCBLAS 1 #define HAVE_LIBGSL 1 #define HAVE_LIBGMP 1 #define HAVE_PTHREAD_PRIO_INHERIT 1 #define HAVE_PTHREAD_BARRIERS 1 #define HAVE_POSIX_FALLOCATE 1 #define HAVE_FFTW 1 #define HAVE_THREADED_FFTW 1 #define SWIFT_RANDOM_SEED_XOR 0 #define HAVE_HDF5 1 #define HAVE_LUSTREAPI 1 #define HAVE_FE_ENABLE_EXCEPT 1 #define HAVE_SETAFFINITY 1 #define HAVE_LIBNUMA 1 #define HAVE_IMMINTRIN_H 1 #define HAVE_SYS_TIME_H 1 #define TIME_WITH_SYS_TIME 1 #define HAVE_SYS_TIME_H 1 #define HAVE_CLOCK_GETTIME 1 #define HAVE_EXP10 1 #define HAVE_EXP10F 1 #define HAVE_SINCOS 1 #define HAVE_SINCOSF 1 #define HAVE_MATH_H 1 #define HAVE_DECL___SINCOS 1 #define HAVE___SINCOS 1 #define HAVE___SINCOSF 1 #define HAVE_DECL___SINCOSF 1 #define HAVE___SINCOS 1 #define HAVE___SINCOSF 1 #define HAVE_BACKTRACE 1 #define HAVE_BACKTRACE_SYMBOLS 1 #define MULTI_SOFTENING_GRAVITY 1 #define SPHENIX_SPH 1 #define NONE_MHD 1 #define CUBIC_SPLINE_KERNEL 1 #define HYDRO_DIMENSION_3D 3 #define EOS_IDEAL_GAS 1 #define HYDRO_GAMMA_5_3 5./3. #define FIXED_SOFTENING 1 #define RIEMANN_SOLVER_NONE 1 #define CHEMISTRY_NONE 1 #define COOLING_NONE 1 #define TRACERS_NONE 1 #define EXTRA_IO_NONE 1 #define STARS_BASIC 1 #define FEEDBACK_NONE 1 #define FEEDBACK_NR_RAYS_SNII 1 #define FEEDBACK_NR_RAYS_SNIa 1 #define FEEDBACK_NR_RAYS_AGN 50 #define BLACK_HOLES_NONE 1 #define SINK_NONE 1 #define SIDM_NONE 1 #define FORCING_NONE 1 #define EXTERNAL_POTENTIAL_NONE 1 #define ENTROPY_FLOOR_NONE 1 #define PRESSURE_FLOOR_NONE 1 #define STAR_FORMATION_NONE 1 #define SELF_GRAVITY_MULTIPOLE_ORDER 4 #define RT_RIEMANN_SOLVER_NONE 1 #define RT_NONE 1 #define SWIFT_CONFIG_FLAGS "--disable-optimization" #define PACKAGE_URL "www.swiftsim.com" configure: exit 0